Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P18
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 52 3e-07
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 52 3e-07
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 50 2e-06
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 50 2e-06
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 49 2e-06
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 49 2e-06
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 49 2e-06
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 49 2e-06
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 49 2e-06
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 49 2e-06
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 44 1e-04
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 44 1e-04
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 40 0.002
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 40 0.002
U41746-6|AAA83333.1| 388|Caenorhabditis elegans Mediator protei... 31 0.93
Z83238-11|CAE11318.1| 326|Caenorhabditis elegans Hypothetical p... 29 2.8
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 28 6.5
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 28 6.5
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 52.4 bits (120), Expect = 3e-07
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Frame = +1
Query: 118 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEIN-TVLRLHPH 294
L S DF L+ + N TES FV S LS LS + A ET DEI +L
Sbjct: 13 LLHSETDFGLSLLRQQNL-TES-FVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATD 70
Query: 295 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXX 471
+ + NI + + G + + +F + + + DV+ + ++L +
Sbjct: 71 EELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFED 130
Query: 472 XXXXXXXINDFVRSATHEAIDEIVTPSELDGVLL-VLIDALYFKGNWRVLFPYENT 636
IN+FV T I +I+ P + L+ VL +A YFK NW+ F E+T
Sbjct: 131 QEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKEST 186
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 52.4 bits (120), Expect = 3e-07
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Frame = +1
Query: 118 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEIN-TVLRLHPH 294
L S DF L+ + N TES FV S LS LS + A ET DEI +L
Sbjct: 13 LLHSETDFGLSLLRQQNL-TES-FVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATD 70
Query: 295 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXX 471
+ + NI + + G + + +F + + + DV+ + ++L +
Sbjct: 71 EELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFED 130
Query: 472 XXXXXXXINDFVRSATHEAIDEIVTPSELDGVLL-VLIDALYFKGNWRVLFPYENT 636
IN+FV T I +I+ P + L+ VL +A YFK NW+ F E+T
Sbjct: 131 QEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANWQTKFKKEST 186
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Frame = +1
Query: 190 VVSGLSAWAILSTLSFGAAEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDGGV-LEH 366
V+S LS L+ + GA T E+ VL ++ +++ +G D GV +
Sbjct: 26 VLSPLSISLGLALIHAGACGSTQKELEDVLGGSR---IFEEFSGLMEAVGDTDNGVETKI 82
Query: 367 SGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVT 546
+F++ +++ + + V+ + L + +N FV + T+ I +++
Sbjct: 83 VNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIP 142
Query: 547 PSELDGVLLVLIDALYFKGNWRVLFPYENT 636
+ L++A+YFK +W+ F E+T
Sbjct: 143 ADSANNAFAFLVNAMYFKADWQSKFAKEST 172
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Frame = +1
Query: 190 VVSGLSAWAILSTLSFGAAEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDGGV-LEH 366
V+S LS L+ + GA T E+ VL ++ +++ +G D GV +
Sbjct: 26 VLSPLSISLGLALIHAGACGSTQKELEDVLGGSR---IFEEFSGLMEAVGDTDNGVETKI 82
Query: 367 SGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIVT 546
+F++ +++ + + V+ + L + +N FV + T+ I +++
Sbjct: 83 VNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIP 142
Query: 547 PSELDGVLLVLIDALYFKGNWRVLFPYENT 636
+ L++A+YFK +W+ F E+T
Sbjct: 143 ADSANNAFAFLVNAMYFKADWQSKFAKEST 172
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 49.2 bits (112), Expect = 2e-06
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Frame = +1
Query: 118 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 294
L +S DF GL+ + N F S LS LS + A ET D+I L +
Sbjct: 4 LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61
Query: 295 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXX 471
+ + NI + + G ++ + +F + + + + DV+ + + L +
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 472 XXXXXXXINDFVRSATHEAIDEIVTPSELDGVLL-VLIDALYFKGNWRVLFPYENT 636
IN+FVR T + I +I+ ++ L+ VL +ALYFK +W+ F ++T
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 49.2 bits (112), Expect = 2e-06
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Frame = +1
Query: 118 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 294
L +S DF GL+ + N F S LS LS + A ET D+I L +
Sbjct: 4 LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61
Query: 295 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXX 471
+ + NI + + G ++ + +F + + + + DV+ + + L +
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 472 XXXXXXXINDFVRSATHEAIDEIVTPSELDGVLL-VLIDALYFKGNWRVLFPYENT 636
IN+FVR T + I +I+ ++ L+ VL +ALYFK +W+ F ++T
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 49.2 bits (112), Expect = 2e-06
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Frame = +1
Query: 118 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 294
L +S DF GL+ + N F S LS LS + A ET D+I L +
Sbjct: 4 LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61
Query: 295 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXX 471
+ + NI + + G ++ + +F + + + + DV+ + + L +
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 472 XXXXXXXINDFVRSATHEAIDEIVTPSELDGVLL-VLIDALYFKGNWRVLFPYENT 636
IN+FVR T + I +I+ ++ L+ VL +ALYFK +W+ F ++T
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 49.2 bits (112), Expect = 2e-06
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Frame = +1
Query: 118 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 294
L +S DF GL+ + N F S LS LS + A ET D+I L +
Sbjct: 4 LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61
Query: 295 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXX 471
+ + NI + + G ++ + +F + + + + DV+ + + L +
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 472 XXXXXXXINDFVRSATHEAIDEIVTPSELDGVLL-VLIDALYFKGNWRVLFPYENT 636
IN+FVR T + I +I+ ++ L+ VL +ALYFK +W+ F ++T
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 49.2 bits (112), Expect = 2e-06
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Frame = +1
Query: 118 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 294
L +S DF GL+ + N F S LS LS + A ET D+I L +
Sbjct: 4 LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61
Query: 295 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXX 471
+ + NI + + G ++ + +F + + + + DV+ + + L +
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 472 XXXXXXXINDFVRSATHEAIDEIVTPSELDGVLL-VLIDALYFKGNWRVLFPYENT 636
IN+FVR T + I +I+ ++ L+ VL +ALYFK +W+ F ++T
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 49.2 bits (112), Expect = 2e-06
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Frame = +1
Query: 118 LKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVL-RLHPH 294
L +S DF GL+ + N F S LS LS + A ET D+I L +
Sbjct: 4 LLQSETDFGLGLLRQQNISESLAF--SPLSIALALSLVHVAAKGETRDQIREALVKGSTD 61
Query: 295 VCFNRKYFNILKEIGKNDGGV-LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXX 471
+ + NI + + G ++ + +F + + + + DV+ + + L +
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 472 XXXXXXXINDFVRSATHEAIDEIVTPSELDGVLL-VLIDALYFKGNWRVLFPYENT 636
IN+FVR T + I +I+ ++ L+ VL +ALYFK +W+ F ++T
Sbjct: 122 KEATAEAINNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDST 177
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 43.6 bits (98), Expect = 1e-04
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Frame = +1
Query: 139 FNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCF--NR 309
F L++ + + + V S +S L+ + GA T +I N+V+ F +
Sbjct: 15 FGIKLLSDLTSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHF 74
Query: 310 KYFNILKEIGKNDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXX 489
+ N L ND L + +F+ + + + F +++ +E + +
Sbjct: 75 SFINKLLNSSVNDVETLI-ANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAK 133
Query: 490 XINDFVRSATHEAIDEIVTPSELDGVLLVLIDALYFKGNWRVLF 621
+N F+ +T I +++ P L V +LI+A++F+G+WR F
Sbjct: 134 IMNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKF 177
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 43.6 bits (98), Expect = 1e-04
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Frame = +1
Query: 139 FNAGLVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCF--NR 309
F L++ + + + V S +S L+ + GA T +I N+V+ F +
Sbjct: 15 FGIKLLSDLTSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHF 74
Query: 310 KYFNILKEIGKNDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXX 489
+ N L ND L + +F+ + + + F +++ +E + +
Sbjct: 75 SFINKLLNSSVNDVETLI-ANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAK 133
Query: 490 XINDFVRSATHEAIDEIVTPSELDGVLLVLIDALYFKGNWRVLF 621
+N F+ +T I +++ P L V +LI+A++F+G+WR F
Sbjct: 134 IMNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKF 177
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Frame = +1
Query: 190 VVSGLSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCFNRKYFNILKEIGKNDGGVLEH 366
V S LS +LS + G + D+I NT+L + + KE+ GV +
Sbjct: 25 VFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKGVEVY 84
Query: 367 -SGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIV 543
+ +++ V F ++ L IN FV +AT+ I I
Sbjct: 85 LANKVYLKKGFTVNPTFLSTALKNYGADAKSLD-LTTPAAVQEINSFVNTATNGKIKNIA 143
Query: 544 TPSELDGVLLVLIDALYFKGNW 609
T + + +LI+++YFK +W
Sbjct: 144 TQDSIKDAIALLINSIYFKADW 165
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Frame = +1
Query: 190 VVSGLSAWAILSTLSFGAAEETFDEI-NTVLRLHPHVCFNRKYFNILKEIGKNDGGVLEH 366
V S LS +LS + G + D+I NT+L + + KE+ GV +
Sbjct: 25 VFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKGVEVY 84
Query: 367 -SGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXXINDFVRSATHEAIDEIV 543
+ +++ V F ++ L IN FV +AT+ I I
Sbjct: 85 LANKVYLKKGFTVNPTFLSTALKNYGADAKSLD-LTTPAAVQEINSFVNTATNGKIKNIA 143
Query: 544 TPSELDGVLLVLIDALYFKGNW 609
T + + +LI+++YFK +W
Sbjct: 144 TQDSIKDAIALLINSIYFKADW 165
>U41746-6|AAA83333.1| 388|Caenorhabditis elegans Mediator protein
27 protein.
Length = 388
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 555 FTRCYYFINSFVSCRSNEIVYCSRGSRVIVPR*FINFRNSCIL 427
F +C +I S+V+C S + YC + R +P + +S I+
Sbjct: 335 FAQCNNYIQSYVNCFSTKCYYCKKHLRQFMPPTVVTRESSPII 377
>Z83238-11|CAE11318.1| 326|Caenorhabditis elegans Hypothetical
protein T08G3.12 protein.
Length = 326
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = -2
Query: 359 KTPPSFLPISFKILKYFLLKHTCGCSLSTVLISSKVSSAAPNDSVDRIAHADSPDTTKWL 180
KTP + P+ F IL + +LST+ I + SAA S +A+ P + ++
Sbjct: 40 KTPKTLQPVKFSILVMHITCFWLDFNLSTLSIPYLIYSAAAGQSFGILAYLKIPMSFQFY 99
Query: 179 SVS*LTLVTSPAL 141
+ + PA+
Sbjct: 100 MGATAVFLLGPAI 112
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 244 AEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDG 351
AEETF I TV L+ H +++N L E+G+ G
Sbjct: 260 AEETFSSIRTVHSLNGHKRELDRFYNAL-EVGRQTG 294
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 244 AEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDG 351
AEETF I TV L+ H +++N L E+G+ G
Sbjct: 260 AEETFSSIRTVHSLNGHKRELDRFYNAL-EVGRQTG 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,519,007
Number of Sequences: 27780
Number of extensions: 261785
Number of successful extensions: 614
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -