Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P18
(642 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 49 3e-06
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 36 0.023
At2g13650.2 68415.m01505 GDP-mannose transporter (GONST1) identi... 32 0.37
At2g13650.1 68415.m01504 GDP-mannose transporter (GONST1) identi... 32 0.37
At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein... 31 0.49
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 31 0.49
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 48.8 bits (111), Expect = 3e-06
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Frame = +1
Query: 151 LVTRVNQETESHFVVSGLSAWAILSTLSFGAAEETFDEINTVLRLHPHVCFNRKYFNILK 330
++T V+Q S+ + S S +LS ++ G+A T D+I + L+ N I+
Sbjct: 21 VITTVSQN--SNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNSFSSEIVS 78
Query: 331 EI----GKNDGGVLEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXXXXXXXX-I 495
+ N G L + +ID ++ FKQ ++++ + N+ + +
Sbjct: 79 AVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEV 138
Query: 496 NDFVRSATHEAIDEIVTPSELDGVL-LVLIDALYFKGNWRVLFPYENTE 639
N + T+ I E++ D + L+ +ALYFKG W F T+
Sbjct: 139 NSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQ 187
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 35.9 bits (79), Expect = 0.023
Identities = 36/163 (22%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Frame = +1
Query: 181 SHFVVSGLSAWAILSTLSFGAAEETFDEINTVLRLHPHVCFNRKYFNILKEIGKNDGGV- 357
S+ V S +S +L ++ G+ T ++I + + L N + + NDG
Sbjct: 29 SNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLAKTVS-VALNDGMER 87
Query: 358 ----LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXX-XXXXXXINDFVRSATH 522
L + ++ID ++ FK ++N+ + N++ + +N + T+
Sbjct: 88 SDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTN 147
Query: 523 EAIDEIVTPSELDGV---LLVLIDALYFKGNWRVLFPYENTES 642
I EI++ + + +L+L +A+YFKG W F + T+S
Sbjct: 148 GLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKS 190
>At2g13650.2 68415.m01505 GDP-mannose transporter (GONST1) identical
to GDP-mannose transporter SP:Q941R4 from [Arabidopsis
thaliana]
Length = 284
Score = 31.9 bits (69), Expect = 0.37
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +1
Query: 91 CNDYTAHQFLKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILST--LSFGAAEETFDE 264
C+ ++F+ S Y+FNAG+ + Q S +V GLS +++T L+ + F
Sbjct: 45 CSMILVNKFVLSS-YNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPV 103
Query: 265 INTVLRLHPHVCFNRKYFNI-LKEIGKNDGGVLEHSGAMFIDSK 393
+ + F+ KY N+ + + KN V+ G M++ +K
Sbjct: 104 NVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK 147
>At2g13650.1 68415.m01504 GDP-mannose transporter (GONST1) identical
to GDP-mannose transporter SP:Q941R4 from [Arabidopsis
thaliana]
Length = 333
Score = 31.9 bits (69), Expect = 0.37
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +1
Query: 91 CNDYTAHQFLKRSLYDFNAGLVTRVNQETESHFVVSGLSAWAILST--LSFGAAEETFDE 264
C+ ++F+ S Y+FNAG+ + Q S +V GLS +++T L+ + F
Sbjct: 45 CSMILVNKFVLSS-YNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPV 103
Query: 265 INTVLRLHPHVCFNRKYFNI-LKEIGKNDGGVLEHSGAMFIDSK 393
+ + F+ KY N+ + + KN V+ G M++ +K
Sbjct: 104 NVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNK 147
>At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein 1
(SOL1) identical to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain; supporting cDNA
gi|7767426|gb|AF205142.1|AF205142
Length = 609
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 281 LSTVLISSKVSSAAPNDSVDRIAHADSPDTTKW 183
+S LI S +++ +PN ++H DSP++T W
Sbjct: 554 MSENLIHSPITTLSPNSKRVSLSHLDSPESTPW 586
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 31.5 bits (68), Expect = 0.49
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 358 LEHSGAMFIDSKINVYEQFKQDVQNTGVSEVNELPWXXX-XXXXXXINDFVRSATHEAID 534
L + ++ID ++ FK ++N+ + +++ + +N + T+ I
Sbjct: 27 LSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGLIK 86
Query: 535 EIVTPSELDGV---LLVLIDALYFKGNWRVLFPYENTE 639
+I++ +D + LVL +A+YFKG W F T+
Sbjct: 87 QILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTK 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,620,447
Number of Sequences: 28952
Number of extensions: 237962
Number of successful extensions: 578
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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