Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P16
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1107 - 24024387-24024497,24025799-24026410 30 1.4
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 30 1.8
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 29 2.4
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 29 2.4
02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711 29 2.4
01_06_1318 - 36261483-36262811 29 2.4
01_05_0635 - 23847255-23847287,23847397-23848083,23848178-238485... 29 3.2
07_01_0533 + 3942813-3943164,3943244-3943458 29 4.2
10_08_0997 - 22115005-22115823 28 5.6
05_05_0223 - 23406814-23407477,23407597-23407919 28 5.6
03_05_0183 - 21681673-21682524 28 5.6
01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159... 28 5.6
06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315 28 7.4
06_02_0166 + 12522172-12522890,12523567-12524596 28 7.4
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821... 28 7.4
04_04_0024 - 22216105-22217856 28 7.4
10_08_0957 + 21801347-21801710,21802319-21802649,21803052-218031... 27 9.7
08_02_0045 - 11560147-11560434,11560949-11560960,11561079-115611... 27 9.7
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 27 9.7
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 27 9.7
06_02_0169 - 12535102-12536062,12536949-12537646 27 9.7
03_05_0180 + 21593763-21594605 27 9.7
03_05_0179 - 21583234-21584336,21586274-21586358,21586665-215867... 27 9.7
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 561 STSMESALPSRPAAPIAFNSTPCTTNRKRRSPGCTPTSDSQPSSS 427
S S + A P+ AAP +TP +++K +P PT+ + P++S
Sbjct: 18 SASAQKATPTPAAAPA---TTPPASSKKTPAPAAAPTTTTPPAAS 59
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 504 STPCTTNRKRRSPGCTPTSDSQPSSSCDAFISWSC-RSGSCAPLFKYSLVCH 352
S P +PG TP S + P + CD + ++C S +C +++Y C+
Sbjct: 353 SYPLKKGENPPNPGPTPPSPTPPPTVCDNY--YTCPDSTTCCCIYEYGKYCY 402
>03_05_1122 + 30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -2
Query: 495 CTTNRKRRSPGCTP--TSDSQPSS-SCDAFISWSCR 397
C+ ++ PGC+P T+ S SS +CD F SCR
Sbjct: 1008 CSQCEEKYHPGCSPETTNTSNVSSQACDLFCQQSCR 1043
>02_05_0232 +
27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -2
Query: 576 ICXRDSTSMESALPSRPAAPIAFNSTPCTTNRKRRSPGCTPTSDSQPSSS 427
IC R++ + A+P PA +A + + + + RS P S+S+ SSS
Sbjct: 212 ICTREANTTVPAIPPSPAHTVASTLSSSSISSRMRSMSLHP-SESEASSS 260
>02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711
Length = 372
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 311 RHATSRHVAVELRR*HTKEYLKRGAHEPERHDHEMNASQEEEGCESDVGVQ 463
R A R A+ LRR ++ L E D E + S+E +SDVG Q
Sbjct: 101 RRARIRERALLLRRHEEEQLLLLHPQHQEEEDEEASESEETAESDSDVGEQ 151
>01_06_1318 - 36261483-36262811
Length = 442
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -2
Query: 546 SALPSRPAAPIAFNSTPCTTNRKRRSPGCTPTSDSQPSSSCDAFISWSCRSGS 388
SAL RP A + F S PC + + R +P + S C +S++ S S
Sbjct: 106 SALSFRPRASLTFASVPCDSAQCRSRDLPSPPACDGASKQCRVSLSYADGSSS 158
>01_05_0635 -
23847255-23847287,23847397-23848083,23848178-23848540,
23848633-23848725,23848820-23848870,23849031-23849304,
23849766-23850595
Length = 776
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -2
Query: 558 TSMESALPSRPAAPIAFNSTPCTTNRK-RRS---PGCTPTSDSQ 439
T +A P + AP A STPC+T RK +RS C T DS+
Sbjct: 588 TLASNASPQQSPAPSAQISTPCSTQRKVKRSILAGNCFNTPDSK 631
>07_01_0533 + 3942813-3943164,3943244-3943458
Length = 188
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 573 CXRDSTSMES-ALPSRPAAPIAFNSTPCTTNRKRRSPGCTPTSDSQPSS 430
C M S A P+ PAAP + TP T + +P T+ Q +S
Sbjct: 116 CSTVGVPMPSPATPATPAAPAVPSETPAGTGGSKATPTTATTTTGQSAS 164
>10_08_0997 - 22115005-22115823
Length = 272
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 335 RRDVTWRDARCHSARRAAVSHLRVMSEVLRCGAV*CRPLL 216
R++V W DAR A A + R++ + LRC A P++
Sbjct: 103 RKNVAWADARRAEAVEIASAARRLLEKELRCMAARDHPVI 142
>05_05_0223 - 23406814-23407477,23407597-23407919
Length = 328
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -2
Query: 627 SKVSHAAGPPEAVT--EERI--CXRDSTSMESALPSRPAAP 517
S+ SH + PPEA EER+ C S E + S P AP
Sbjct: 242 SETSHESSPPEAPAGEEERLRPCTAAGVSDEPIMESTPPAP 282
>03_05_0183 - 21681673-21682524
Length = 283
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 335 RRDVTWRDARCHSARRAAVSHLRVMSEVLRCGAV*CRPLL 216
R++V W DAR A A + R++ + LRC A P++
Sbjct: 103 RKNVAWADARRAEAVEIASAARRLLEKELRCMAARDHPVI 142
>01_05_0808 -
25414486-25414677,25415114-25415290,25415839-25415928,
25416016-25416081,25416170-25416240,25416375-25416450,
25416567-25420098,25421464-25421834
Length = 1524
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -2
Query: 597 EAVTEERICXRDSTSMESALPSRPAAPIAFNSTPCTTNRKRRSPGCTPTSDSQPSSSCDA 418
E +T RI + T E+AL ++ A N T C N K P +Q S +
Sbjct: 499 EKLTMRRIVKEEKTYEETALVNKNGDSSAVNLTHCDHNEKGVLQPRKPQHTAQSGSKLEQ 558
Query: 417 FISWS 403
W+
Sbjct: 559 LGKWT 563
>06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315
Length = 678
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 549 ESALPSRPAAPIAFNSTPCTTNRKRRSP-GCTPTSDSQPSSSCDAFISWSCRSGSCA 382
+ LP P+A + +S+P SP T + + P+S+ A SW+C S + A
Sbjct: 607 QDLLPGSPSATSSLSSSPSPAP----SPDSATASRSASPTSARPATSSWTCTSAATA 659
>06_02_0166 + 12522172-12522890,12523567-12524596
Length = 582
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 525 LVCSATRSPCSCYRARRCALPSL 593
+VCS+ S S R RRCAL SL
Sbjct: 112 MVCSSVGSGLSVCRTRRCALASL 134
>05_04_0347 +
20479682-20479753,20480136-20480813,20481143-20482195,
20482345-20482406,20482491-20482541,20482635-20482719,
20483253-20483342,20483472-20483563,20483704-20483728
Length = 735
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -2
Query: 282 CQPPSRDVGSAALRCCVMQTSTVVTAEEHNPAHRCILRKAADIHNYTGTQR 130
C+P + + A Q +TVV P R + R+ A +H+ T R
Sbjct: 334 CRPSTAERRPATRELAPKQANTVVPCRPSTPNRRPMTRELAPVHSSIATPR 384
>04_04_0024 - 22216105-22217856
Length = 583
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -2
Query: 537 PSRPAAPIAFNSTPCTTNRKR--RSPGCTPTSDSQPSSSCDAFISWSCRSG 391
PS AA A PC ++ + C+P S + + SC I CRSG
Sbjct: 108 PSPLAAAAALRLAPCASSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSG 158
>10_08_0957 +
21801347-21801710,21802319-21802649,21803052-21803112,
21803266-21803334,21803631-21803846,21804012-21804071
Length = 366
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -2
Query: 297 CSTGCCQPPSRDVGSAALRCCVMQTSTVVTAEEHNPAHRCILRKAA 160
CS GC P G+ +RC + T V A PAH R AA
Sbjct: 7 CS-GCRTPLQLPHGAPCIRCAICGAVTYVAAAAPPPAHGDPARGAA 51
>08_02_0045 -
11560147-11560434,11560949-11560960,11561079-11561102,
11561562-11561801
Length = 187
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 150 CECPRLFSGYTGVLDCVPPR*QQ*RSALHSTAAQHFRHHAKVADSSPSSRVTPC 311
C L G + + R QQ R+A H H H +SP + +TPC
Sbjct: 26 CPLRELGGGVAVRVQQLAVRVQQLRAAHHGGRKPHDHHTVSACIASPIASLTPC 79
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 561 STSMESALPSRPAAPIAFNSTPCTTNRKRRSPGCTP 454
+++ +LP PAA + S+P RKRR G P
Sbjct: 13 ASNQRRSLPPSPAAASSVGSSPAFPPRKRRRSGRPP 48
>06_03_1283 -
28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -1
Query: 190 STPVYPEKSRGHSQLHWHSTIRQLLIQYFNCYFVNDS*INTFCS 59
S P ++ H+ HW LL+ C V + I TFC+
Sbjct: 323 SVAAIPAIAKAHNLKHWFQLALVLLVSACPCALVLSTPIATFCA 366
>06_02_0169 - 12535102-12536062,12536949-12537646
Length = 552
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 525 LVCSATRSPCSCYRARRCALPSL 593
+VCS+ S S R RRCAL SL
Sbjct: 105 MVCSSVGSGFSVCRTRRCALASL 127
>03_05_0180 + 21593763-21594605
Length = 280
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 335 RRDVTWRDARCHSARRAAVSHLRVMSEVLRCGAV*CRPLL 216
R+ V W DAR A A + R++ + LRC A P++
Sbjct: 103 RKHVAWADARRAEAVEIASAARRLLEKELRCMAARDHPVI 142
>03_05_0179 -
21583234-21584336,21586274-21586358,21586665-21586713,
21586801-21586874,21586958-21587050,21587120-21587174,
21587348-21587421,21587702-21587814,21587911-21588168,
21588915-21589012,21589139-21589256,21589754-21589848,
21590001-21590159,21590336-21590525,21590881-21591021,
21591142-21591176,21591659-21591699
Length = 926
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 335 RRDVTWRDARCHSARRAAVSHLRVMSEVLRCGAV*CRPLL 216
R+ V W DAR A A + R++ + LRC A P++
Sbjct: 749 RKHVAWADARRAEAVEIASAARRLLEKELRCMAARDHPVI 788
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,082,605
Number of Sequences: 37544
Number of extensions: 310038
Number of successful extensions: 1274
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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