Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_P16
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        29   0.051
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        29   0.051
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        29   0.051
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    26   0.36 
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    21   7.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 0.051
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 117 NNCRIVECQCSCECPRLFSGYTGVLDCV 200
           N C + E    C+ P ++SGY G L C+
Sbjct: 217 NMCALCEKPEVCDYPDIYSGYEGALRCL 244


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 0.051
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 117 NNCRIVECQCSCECPRLFSGYTGVLDCV 200
           N C + E    C+ P ++SGY G L C+
Sbjct: 217 NMCALCEKPEVCDYPDIYSGYEGALRCL 244


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 28.7 bits (61), Expect = 0.051
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 117 NNCRIVECQCSCECPRLFSGYTGVLDCV 200
           N C + E    C+ P ++SGY G L C+
Sbjct: 217 NMCALCEKPEVCDYPDIYSGYEGALRCL 244


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 238 LCNADLYCCHRGGTQSSTPVYPEKSRG-HSQLHWH 137
           LCN   Y  ++G  +S+  ++P+++ G H    W+
Sbjct: 153 LCNHIKYSTNKGNIRSAITIFPQRTDGKHDYRVWN 187


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 492 CMACC*MRSARLVCSATRSPCSCYR 566
           C  C    + +  CS T +PC  +R
Sbjct: 87  CNKCIGCSAEKFECSKTSNPCLPHR 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,828
Number of Sequences: 438
Number of extensions: 3129
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)