Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_P15
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.4  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 91  SMISGFGGAVIGSPRPPL 38
           S+ SG GG + G P P L
Sbjct: 82  SLSSGLGGGLSGMPMPAL 99


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 62  HSATKTGDHRCTAPICD 112
           H  T TG+ R   PIC+
Sbjct: 365 HLRTHTGEKRFACPICN 381


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 390 LWLFTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVL 509
           L+L+     +VTC V    + ++ T   +  ++ SL Y+L
Sbjct: 135 LFLYIFTYLSVTCYVTYAWSPIDHTESNIINDMCSLYYIL 174


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 69  PPKPEIIDVPRLSVTPPVIIPILANSAAPAETS 167
           PP P++  +P     PP+  P + N +A  E++
Sbjct: 175 PPLPQVPPLP----LPPIFPPTMINPSAICESA 203


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 102 LSVTPPVIIPIL 137
           LS+ PP++IP L
Sbjct: 558 LSIGPPLVIPFL 569


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 102 LSVTPPVIIPIL 137
           LS+ PP++IP L
Sbjct: 558 LSIGPPLVIPFL 569


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,912
Number of Sequences: 336
Number of extensions: 2019
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)