Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P15
(623 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77196-1|CAA54416.1| 410|Homo sapiens lysosome-associated membr... 35 0.27
U36336-1|AAA91149.1| 410|Homo sapiens lysosome-associated membr... 35 0.27
S79873-1|AAB35426.1| 410|Homo sapiens lysosome-associated membr... 35 0.27
J04183-1|AAA60383.1| 408|Homo sapiens lysosomal membrane glycop... 35 0.27
BC002965-1|AAH02965.1| 410|Homo sapiens LAMP2 protein protein. 35 0.27
AY561849-1|AAS67876.1| 411|Homo sapiens lysosomal-associated me... 35 0.27
AC002476-2|AAB67313.1| 410|Homo sapiens lysosome-associated mem... 35 0.27
AC002476-1|AAB67314.1| 410|Homo sapiens lysosome-associated mem... 35 0.27
L08582-1|AAF66141.1| 355|Homo sapiens lysosomal-associated memb... 33 0.62
L09717-1|AAB41647.1| 410|Homo sapiens lysosomal membrane glycop... 33 0.82
J04182-1|AAA60382.1| 416|Homo sapiens lysosomal membrane glycop... 33 0.82
J03263-1|AAA59524.1| 385|Homo sapiens LAMP1 protein. 33 0.82
BC093044-1|AAH93044.1| 417|Homo sapiens lysosomal-associated me... 33 0.82
BC021288-1|AAH21288.1| 417|Homo sapiens lysosomal-associated me... 33 0.82
BC007845-1|AAH07845.2| 248|Homo sapiens LAMP1 protein protein. 33 0.82
BC006345-1|AAH06345.2| 308|Homo sapiens LAMP1 protein protein. 33 0.82
AL136221-7|CAI13797.1| 417|Homo sapiens lysosomal-associated me... 33 0.82
AB209319-1|BAD92556.1| 392|Homo sapiens LAMP1 protein variant p... 33 0.82
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 30 7.6
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 30 7.6
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 30 7.6
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 30 7.6
>X77196-1|CAA54416.1| 410|Homo sapiens lysosome-associated membrane
protein-2 protein.
Length = 410
Score = 34.7 bits (76), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC++ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLLATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>U36336-1|AAA91149.1| 410|Homo sapiens lysosome-associated membrane
protein-2b protein.
Length = 410
Score = 34.7 bits (76), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC++ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLLATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>S79873-1|AAB35426.1| 410|Homo sapiens lysosome-associated membrane
protein-2 protein.
Length = 410
Score = 34.7 bits (76), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC++ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLLATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>J04183-1|AAA60383.1| 408|Homo sapiens lysosomal membrane
glycoprotein-2 protein.
Length = 408
Score = 34.7 bits (76), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC++ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLLATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>BC002965-1|AAH02965.1| 410|Homo sapiens LAMP2 protein protein.
Length = 410
Score = 34.7 bits (76), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC++ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLLATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>AY561849-1|AAS67876.1| 411|Homo sapiens lysosomal-associated
membrane protein 2C protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC++ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLLATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>AC002476-2|AAB67313.1| 410|Homo sapiens lysosome-associated
membrane protein-2b (LAMP2b), alternatively spliced form
of protein.
Length = 410
Score = 34.7 bits (76), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC++ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLLATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>AC002476-1|AAB67314.1| 410|Homo sapiens lysosome-associated
membrane protein-2 (LAMP2) protein.
Length = 410
Score = 34.7 bits (76), Expect = 0.27
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC++ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLLATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>L08582-1|AAF66141.1| 355|Homo sapiens lysosomal-associated
membrane glycoprotein-1 protein.
Length = 355
Score = 33.5 bits (73), Expect = 0.62
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 167 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNTTSASGSC 208
>L09717-1|AAB41647.1| 410|Homo sapiens lysosomal membrane
glycoprotein-2 protein.
Length = 410
Score = 33.1 bits (72), Expect = 0.82
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 399 FTDNKKNVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSCDGLNQWLTI 578
++ N N TC+ QLN+T KVA ++N+ N T S GSC L +
Sbjct: 223 YSVNNGNDTCLRATMGLQLNITQDKVAS--------VININPNTTHSTGSCRSHTALLRL 274
Query: 579 N 581
N
Sbjct: 275 N 275
>J04182-1|AAA60382.1| 416|Homo sapiens lysosomal membrane
glycoprotein-1 protein.
Length = 416
Score = 33.1 bits (72), Expect = 0.82
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 227 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNKTSASGSC 268
>J03263-1|AAA59524.1| 385|Homo sapiens LAMP1 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.82
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 196 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNKTSASGSC 237
>BC093044-1|AAH93044.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.82
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 228 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNKTSASGSC 269
>BC021288-1|AAH21288.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.82
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 228 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNKTSASGSC 269
>BC007845-1|AAH07845.2| 248|Homo sapiens LAMP1 protein protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.82
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 59 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNKTSASGSC 100
>BC006345-1|AAH06345.2| 308|Homo sapiens LAMP1 protein protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.82
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 119 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNKTSASGSC 160
>AL136221-7|CAI13797.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.82
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 228 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNKTSASGSC 269
>AB209319-1|BAD92556.1| 392|Homo sapiens LAMP1 protein variant
protein.
Length = 392
Score = 33.1 bits (72), Expect = 0.82
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 417 NVTCIVVQFAAQLNVTYPKVAENVTSLAYVLVNVPANATVSNGSC 551
N TC++ QLN+TY + +N T L+N+ N T ++GSC
Sbjct: 217 NGTCLLASMGLQLNLTYER-KDNTTVTR--LLNINPNKTSASGSC 258
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 42 GGLGEP--ITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAA 182
GG EP ++ PP EI P L +PP +P +A A D+ AA
Sbjct: 106 GGCQEPEEMSWPPSGEIASPPELPSSPPPGLPEVAPDATSTGLPDTPAA 154
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 42 GGLGEP--ITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAA 182
GG EP ++ PP EI P L +PP +P +A A D+ AA
Sbjct: 245 GGCQEPEEMSWPPSGEIASPPELPSSPPPGLPEVAPDATSTGLPDTPAA 293
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 42 GGLGEP--ITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAA 182
GG EP ++ PP EI P L +PP +P +A A D+ AA
Sbjct: 245 GGCQEPEEMSWPPSGEIASPPELPSSPPPGLPEVAPDATSTGLPDTPAA 293
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 42 GGLGEP--ITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAA 182
GG EP ++ PP EI P L +PP +P +A A D+ AA
Sbjct: 245 GGCQEPEEMSWPPSGEIASPPELPSSPPPGLPEVAPDATSTGLPDTPAA 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,136,659
Number of Sequences: 237096
Number of extensions: 1245819
Number of successful extensions: 3903
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3874
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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