Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_P12
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81468-4|CAB03877.1|  394|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AL021181-1|CAA15983.1|  394|Caenorhabditis elegans Hypothetical ...    26   9.7  
AF040661-13|AAG24216.1|  351|Caenorhabditis elegans Hypothetical...    26   9.7  
AF016443-5|AAK68183.1|  284|Caenorhabditis elegans Hypothetical ...    26   9.7  

>Z81468-4|CAB03877.1|  394|Caenorhabditis elegans Hypothetical
           protein Y54G11B.1 protein.
          Length = 394

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 13  FLIYITFYEIKLADSNVDPVLIFDICIRAMETN 111
           + +   FY  +   SNV P L F +C+  +  N
Sbjct: 17  YFVIEQFYRFRYLYSNVHPFLSFILCVLGLAAN 49


>AL021181-1|CAA15983.1|  394|Caenorhabditis elegans Hypothetical
           protein Y54G11B.1 protein.
          Length = 394

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 13  FLIYITFYEIKLADSNVDPVLIFDICIRAMETN 111
           + +   FY  +   SNV P L F +C+  +  N
Sbjct: 17  YFVIEQFYRFRYLYSNVHPFLSFILCVLGLAAN 49


>AF040661-13|AAG24216.1|  351|Caenorhabditis elegans Hypothetical
           protein W10G11.7 protein.
          Length = 351

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 193 YASRNAVDVFNYLNIKTVQTEKACDDVVAEL 285
           Y +    DVFN  +      E+AC DV A L
Sbjct: 197 YRAATLDDVFNEFHAAKADAERACQDVGATL 227


>AF016443-5|AAK68183.1|  284|Caenorhabditis elegans Hypothetical
           protein C17E7.13 protein.
          Length = 284

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 146 WQLVVRV*HIL*ENINTQVVMQWM 217
           WQ V    H + EN+N ++ ++WM
Sbjct: 69  WQQVAEAEHRVSENLNLKLTVRWM 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,692,861
Number of Sequences: 27780
Number of extensions: 169677
Number of successful extensions: 418
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)