Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P08
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 30 1.1
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 30 1.1
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 30 1.1
Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine re... 28 4.3
AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine re... 28 4.3
Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF022970-1|AAB69895.1| 142|Caenorhabditis elegans Hypothetical ... 28 5.7
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z99278-8|CAE18037.1| 133|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z82060-4|CAB04885.2| 434|Caenorhabditis elegans Hypothetical pr... 27 9.9
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 9.9
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +1
Query: 151 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 327
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 328 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 453
++ G YW + T + + ++ G E ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +1
Query: 151 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 327
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 328 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 453
++ G YW + T + + ++ G E ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +1
Query: 151 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 327
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 328 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 453
++ G YW + T + + ++ G E ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 6/107 (5%)
Frame = +1
Query: 151 YYPSTYKWDNSV-VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVV 327
Y S YK + V T ++HY AS Y Y + Y H T K +GG V
Sbjct: 229 YGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAV 286
Query: 328 PLL--KERRGEWYWFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 453
++ G YW + T + + ++ G E ++ GNVV
Sbjct: 287 KIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>Z81533-3|CAB04335.1| 327|Caenorhabditis elegans Hypothetical
protein F36G9.5 protein.
Length = 327
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 52 IPPIYEVLPEYFNNGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHC 225
I PI + + NG H A I +GS M+ + + W N+ ++ NT +W C
Sbjct: 163 IYPILCIAIMFPGNGFCSHVAYPI--YGSIMLRVTDTMFGWTNNYILMFNTFLWVSIC 218
>AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine
receptor, class i protein45 protein.
Length = 340
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 475 YMYHNGIPYPVRPNHFHLDHPEYLGELEKIKDY 573
+ YH GI + P +L +PE+ E +K++
Sbjct: 165 FWYHAGIAEDLLPGFVNLTYPEFKAEFSNLKNF 197
>AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine
receptor, class t protein70 protein.
Length = 323
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 189 Y*VEYYCLALPLPKRFYVLLLT 254
Y V Y+C+ALPL F+VL+ T
Sbjct: 15 YGVAYFCIALPLFPVFFVLMKT 36
>Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.11 protein.
Length = 320
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 501 IWYTVMIHVSKIVAFVYDVTTKFTDFTKS 415
+W V + + + V Y + TK DFT S
Sbjct: 99 VWLAVSLAILRAVVIKYPINTKIQDFTSS 127
>AF022970-1|AAB69895.1| 142|Caenorhabditis elegans Hypothetical
protein F13A2.1 protein.
Length = 142
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 478 MYHNGIPYPVRPNHFHL-DHPEYLGELEKIKDYERR 582
M NG P+P HFH+ D + L ELE +D E R
Sbjct: 29 MVLNGTPFPDILRHFHVSDFSKELAELEIKQDAEFR 64
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 27.5 bits (58), Expect = 7.5
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +1
Query: 418 FGEIGELSGNVVNEGYNFGYM 480
F ++G+ + ++ N+GYNFG++
Sbjct: 6 FADLGKSAKDLFNKGYNFGFL 26
>Z99278-8|CAE18037.1| 133|Caenorhabditis elegans Hypothetical
protein Y53C12B.7 protein.
Length = 133
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 427 IGELSGNVVNEGYNFGYMYHNGIPYPVRPNHFH 525
IG G + + ++ NG+P P+ P H H
Sbjct: 56 IGSFRGQPIKTRQHHAFIDDNGVPIPLLPYHEH 88
>Z82060-4|CAB04885.2| 434|Caenorhabditis elegans Hypothetical
protein T27F6.6 protein.
Length = 434
Score = 27.1 bits (57), Expect = 9.9
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 10 STLHIHRSDLEG-YAIPPIYEV--LPEYFNNGEILHTAQRIGVHGSRMIEYYPSTYKWDN 180
ST +HR + G Y I +Y++ L E ++ + + ++++ YP + + +
Sbjct: 57 STDRVHRLNKIGQYMIDELYDIVGLQELWSYYDFVRLSEQVS-------SVYPY-FHYFH 108
Query: 181 SVVIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPL 333
S S V+ H +S + YSLN + HH+ W GG VV L
Sbjct: 109 SGFTGSGVCVFSRH---PIVSTLTNRYSLNG--FAHHIHRGDWFGGKVVGL 154
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 91 NGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHCQSASMSYYLHDYSL 267
+G + + V+G +IEY P+ K + + V + + AS+ +YL+D L
Sbjct: 531 SGSNVKATANVQVNGDSLIEYGPADQKSLIGTNVEFSCEVAKEYVRKASVEWYLNDVLL 589
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,866,865
Number of Sequences: 27780
Number of extensions: 301497
Number of successful extensions: 914
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -