Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P05
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3) 45 4e-05
SB_47026| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_47264| Best HMM Match : Ion_trans (HMM E-Value=1.19951e-42) 36 0.022
SB_10556| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_23190| Best HMM Match : MHC_I_C (HMM E-Value=1.5) 33 0.20
SB_30237| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 31 0.82
SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22) 29 1.9
SB_25411| Best HMM Match : CDO_I (HMM E-Value=8.6e-06) 29 3.3
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 28 4.4
SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11) 28 4.4
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_17997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 28 5.8
SB_25222| Best HMM Match : Flagellin_C (HMM E-Value=0.72) 27 7.6
SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8) 27 7.6
>SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3)
Length = 861
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTT 334
S G +RG T +RG T + GTT +RG T +RG T G++ S GTT
Sbjct: 209 SRGTTGASRGTTGASRGTTGASRGTTGASRGTTGASRGTTGASRGITGASRGTT 262
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +RG+T +RG T + GTT +RG T +RG T G + S GTT S T
Sbjct: 188 SRGTTGTSRGITEASRGTTGTSRGTTGASRGTTGASRGTTGASRGTTGASRGTTGASRGT 247
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTT 334
S G +RG T +RG T + GTT +RG T +RG T G + S GTT
Sbjct: 272 SRGITGASRGTTGASRGTTGASRGTTGASRGTTGTSRGTTGASRGTTGASRGTT 325
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = -2
Query: 474 ARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
+RG+T +RG T + GTT +RG T +RG T G + S GTT S T
Sbjct: 272 SRGITGASRGTTGASRGTTGASRGTTGASRGTTGTSRGTTGASRGTTGASRGT 324
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +RG T +RG T + GTT +RG T +RG T G + S GTT S T
Sbjct: 181 SRGTTGASRGTTGTSRGITEASRGTTGTSRGTTGASRGTTGASRGTTGASRGTTGASRGT 240
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTT 334
S G +RG T +RG T + GTT +RG T +RG T G + S GTT
Sbjct: 195 SRGITEASRGTTGTSRGTTGASRGTTGASRGTTGASRGTTGASRGTTGASRGTT 248
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTT 334
S G +RG T +RG T + GTT +RG T +RG T G + S G T
Sbjct: 279 SRGTTGASRGTTGASRGTTGASRGTTGTSRGTTGASRGTTGASRGTTGASRGNT 332
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +RG T +RG T + GTT +RG T +RG T G + S G T S T
Sbjct: 202 SRGTTGTSRGTTGASRGTTGASRGTTGASRGTTGASRGTTGASRGTTGASRGITGASRGT 261
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +R +T +RG T + GTT +RG T +RG T G + S GTT S T
Sbjct: 258 SRGTTGASRCITGASRGITGASRGTTGASRGTTGASRGTTGASRGTTGTSRGTTGASRGT 317
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +RG T +RG T + GTT +RG T +RG T ++ S G T S T
Sbjct: 223 SRGTTGASRGTTGASRGTTGASRGTTGASRGITGASRGTTGASRCITGASRGITGASRGT 282
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +RG T +RG T + G T +RG T +R T G++ S GTT S T
Sbjct: 230 SRGTTGASRGTTGASRGTTGASRGITGASRGTTGASRCITGASRGITGASRGTTGASRGT 289
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +RG+T +RG T + T +RG T +RG T G + S GTT S T
Sbjct: 244 SRGTTGASRGITGASRGTTGASRCITGASRGITGASRGTTGASRGTTGASRGTTGASRGT 303
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +RG T +R T + G T +RG T +RG T G + S GTT TS T
Sbjct: 251 SRGITGASRGTTGASRCITGASRGITGASRGTTGASRGTTGASRGTTGASRGTTGTSRGT 310
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
S G +RG T +RG T + GTT +R T +RG T G + S GTT S T
Sbjct: 237 SRGTTGASRGTTGASRGITGASRGTTGASRCITGASRGITGASRGTTGASRGTTGASRGT 296
Score = 36.7 bits (81), Expect = 0.012
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -2
Query: 462 TNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGTTLTSPPT 316
T +RG T + GTT +RG T +RG T G + S GTT S T
Sbjct: 178 TGASRGTTGASRGTTGTSRGITEASRGTTGTSRGTTGASRGTTGASRGT 226
>SB_47026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -2
Query: 528 PYTRRSARS*GSIGPNNGARGLTNGARGPTNGAI----GTTNVARGPTNEARGPTNVPIG 361
PY + S G+ P+NG NG P+NG GTT GPT + G T P G
Sbjct: 85 PYNGATVHSNGTTVPSNGTTVPYNGPTVPSNGTTVPSNGTTVPYNGPTVPSNGATVPPNG 144
Query: 360 VSLCSCGTTLTSPPT 316
++ S GTT+ S T
Sbjct: 145 ATVPSNGTTVPSNGT 159
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -2
Query: 528 PYTRRSARS*GSIGPNNGARGLTNGARGPTNGAI----GTTNVARGPTNEARGPTNVPIG 361
PY + S G+ P NGA TNGA P+NGA G T + G T + G T G
Sbjct: 50 PYNGTTVPSNGATVPPNGATVPTNGATVPSNGATVPYNGATVHSNGTTVPSNGTTVPYNG 109
Query: 360 VSLCSCGTTLTSPPT 316
++ S GTT+ S T
Sbjct: 110 PTVPSNGTTVPSNGT 124
Score = 37.9 bits (84), Expect = 0.005
Identities = 26/66 (39%), Positives = 34/66 (51%)
Frame = -2
Query: 528 PYTRRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLC 349
PY + G+ P+NGA NGA PTNGA +N A P N A +N G ++
Sbjct: 43 PYNGTTVPYNGTTVPSNGATVPPNGATVPTNGATVPSNGATVPYNGATVHSN---GTTVP 99
Query: 348 SCGTTL 331
S GTT+
Sbjct: 100 SNGTTV 105
Score = 37.5 bits (83), Expect = 0.007
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -2
Query: 540 LRRPPYTRRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN---V 370
L P + S G+ P NG NG P+NGA N A PTN A P+N V
Sbjct: 25 LTEVPSNGATVPSNGTTVPYNGTTVPYNGTTVPSNGATVPPNGATVPTNGATVPSNGATV 84
Query: 369 PI-GVSLCSCGTTLTSPPT 316
P G ++ S GTT+ S T
Sbjct: 85 PYNGATVHSNGTTVPSNGT 103
Score = 37.5 bits (83), Expect = 0.007
Identities = 27/78 (34%), Positives = 37/78 (47%)
Frame = -2
Query: 528 PYTRRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLC 349
PY + S G+ P+NG NG P+NGA N A P+N P+N G ++
Sbjct: 106 PYNGPTVPSNGTTVPSNGTTVPYNGPTVPSNGATVPPNGATVPSNGTTVPSN---GTTVP 162
Query: 348 SCGTTLTSPPT*QLKPRN 295
+ GTT+ PP P N
Sbjct: 163 TNGTTV--PPNGATVPSN 178
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = -2
Query: 528 PYTRRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLC 349
PY + S G+ P NGA +NG P+NG TN P N A P+N G ++
Sbjct: 127 PYNGPTVPSNGATVPPNGATVPSNGTTVPSNGTTVPTNGTTVPPNGATVPSN---GTTVP 183
Query: 348 SCGTTLTS 325
GTT+ S
Sbjct: 184 FNGTTVPS 191
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 498 GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVP 367
G+ P+NG TNG P NGA +N P N P+N P
Sbjct: 151 GTTVPSNGTTVPTNGTTVPPNGATVPSNGTTVPFNGTTVPSNGP 194
Score = 30.7 bits (66), Expect = 0.82
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -2
Query: 528 PYTRRSARS*GSIGPNNGARGLTNGARGPTNGAI----GTTNVARGPTNEARGPT 376
P + S G+ P NG NGA P+NG GTT + GPT + G T
Sbjct: 148 PSNGTTVPSNGTTVPTNGTTVPPNGATVPSNGTTVPFNGTTVPSNGPTVPSNGAT 202
>SB_47264| Best HMM Match : Ion_trans (HMM E-Value=1.19951e-42)
Length = 1172
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 361 AYRYVGRASRLVGRASRNVGRAYRSVGRTSRSVGQ 465
A + VG SR+VG SR VG R G TSR+VG+
Sbjct: 860 AIKRVGGTSRIVGGTSRVVGEMSRVAGETSRNVGE 894
>SB_10556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1788
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = -2
Query: 528 PYTRRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIG 361
P T R GP G +G GP NG G GP N +GP P G
Sbjct: 734 PGTGRKGPRTSPDGPGTGRKGPGTSPDGPGNGRKGPGTSPDGPGNARKGPGTSPDG 789
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = -2
Query: 537 RRPPYTRRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGP 379
R+ P T G GP G NG +GP G N +GP GP
Sbjct: 738 RKGPRTSPDGPGTGRKGPGTSPDGPGNGRKGPGTSPDGPGNARKGPGTSPDGP 790
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIG 361
S GP NG +G GP G G GP +GP P G
Sbjct: 717 SHGPGNGRKGPGTSPDGPGTGRKGPRTSPDGPGTGRKGPGTSPDG 761
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = -2
Query: 537 RRPPYTRRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIG 361
R+ P T G GP G G +GP G N +GP GP N G
Sbjct: 724 RKGPGTSPDGPGTGRKGPRTSPDGPGTGRKGPGTSPDGPGNGRKGPGTSPDGPGNARKG 782
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = -2
Query: 528 PYTRRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIG 361
P T R GP NG +G GP N G GP +GP P G
Sbjct: 748 PGTGRKGPGTSPDGPGNGRKGPGTSPDGPGNARKGPGTSPDGPGTGRKGPGTSPGG 803
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 489 GPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIG 361
GP G +G GP G G GP + +GP P G
Sbjct: 789 GPGTGRKGPGTSPGGPGTGRKGPGTSPDGPGSGRKGPGTSPDG 831
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = -2
Query: 489 GPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIG 361
GP N +G GP G G GP +GP P G
Sbjct: 775 GPGNARKGPGTSPDGPGTGRKGPGTSPGGPGTGRKGPGTSPDG 817
>SB_23190| Best HMM Match : MHC_I_C (HMM E-Value=1.5)
Length = 182
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSLCSCGT 337
P N +R N +R P N + N +R P N +RG + V + C GT
Sbjct: 128 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSRGSSRVDL--QACKLGT 175
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVS 355
P N +R N +R P N + N +R P N +R P N G S
Sbjct: 121 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVNNSRGSS 164
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
P N +R N +R P N + N +R P N +R P N
Sbjct: 65 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 102
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
P N +R N +R P N + N +R P N +R P N
Sbjct: 72 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 109
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
P N +R N +R P N + N +R P N +R P N
Sbjct: 79 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 116
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
P N +R N +R P N + N +R P N +R P N
Sbjct: 86 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 123
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
P N +R N +R P N + N +R P N +R P N
Sbjct: 93 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 130
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
P N +R N +R P N + N +R P N +R P N
Sbjct: 100 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 137
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
P N +R N +R P N + N +R P N +R P N
Sbjct: 107 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 144
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 486 PNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
P N +R N +R P N + N +R P N +R P N
Sbjct: 114 PVNNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 151
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 480 NGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
N +R N +R P N + N +R P N +R P N
Sbjct: 60 NNSREPVNNSREPVNNSREPVNNSREPVNNSREPVN 95
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 495 SIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTN 373
S P N + N +R P N + N +R P N +R P N
Sbjct: 48 SCEPVNNSCEHVNNSREPVNNSREPVNNSREPVNNSREPVN 88
>SB_30237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 519 RRSARS*GSIGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVS 355
+R + + G +G ++G G NG G T+G +GT NE + +G +
Sbjct: 13 KRMSINDGRLGTDDGGMGTANGGMGTTDGGMGTAEERMDIANERMVTADERVGTA 67
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 492 IGPNNGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNV 370
I PN+GA +NG PTNG T A A P V
Sbjct: 564 IPPNSGAGKASNGKNAPTNGNKAPTRSASPSVTSAASPGTV 604
>SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22)
Length = 233
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = +1
Query: 367 RYVGRASRLVGRASRNVGRAYRSVGRTSRSVGQASRPVVRAYR 495
RY+ SR V SR+V RSV TSRSV SR V+ R
Sbjct: 72 RYILATSRSVLATSRSVLATSRSVLATSRSVLATSRSVLATSR 114
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = +1
Query: 367 RYVGRASRLVGRASRNVGRAYRSVGRTSRSVGQASRPVVRAYR 495
RY+ SR V SR+V RSV TSRSV SR V+ R
Sbjct: 135 RYILATSRSVLATSRSVLATSRSVLATSRSVLATSRSVLATSR 177
>SB_25411| Best HMM Match : CDO_I (HMM E-Value=8.6e-06)
Length = 229
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 382 ASRLVGRASRNVGRAYRSVGRTSRSVGQ--ASRPVVRAYRTSAPCR 513
A + +G R VG R VG TSR VG+ PV R +T+ P R
Sbjct: 103 AIKRIGEKPRVVGETSRIVGETSRVVGEPVVGEPVCRE-QTAIPRR 147
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 462 TNGARGPTNGAIGTTNVARGPTNEARGPTNVPIGVSL 352
T+ GP + ++GT+ PT+ GP +G S+
Sbjct: 542 THAPAGPQHASVGTSMGQSQPTHAPAGPQQASVGTSM 578
>SB_9550| Best HMM Match : GPS (HMM E-Value=1.6e-11)
Length = 1771
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 116 DSLSVEIVWCTSTRLLLKLEKRDFFYIS 199
DSL + ++WCTS L +K + +IS
Sbjct: 1521 DSLLIILIWCTSNGLACNPDKTEIVHIS 1548
>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = -2
Query: 546 PALRRPPYTRRSARS*GSIGPNNG---ARGLTNGARGPTNGAIGTTNVA-RGPTNEARGP 379
PA P ++ + G+ G A G T A G T A G T VA G T G
Sbjct: 687 PAPTSAPGANKTTAAGGTTAAPGGTTVAPGGTTAAPGGTTAAQGGTTVAPGGTTAAPGGT 746
Query: 378 TNVPIGVSLCSCGTT 334
T P G + GTT
Sbjct: 747 TAAPGGTTAAPGGTT 761
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -2
Query: 489 GPNNGARGLTNGARGPTNGAIGTTNVA-RGPTNEARGPTNVPIGVSLCSCGTT 334
G A G T A G T A G T A G T G T P G + GTT
Sbjct: 744 GGTTAAPGGTTAAPGGTTAAPGGTTAAPGGTTAAPGGTTTAPGGTTAAPGGTT 796
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -2
Query: 489 GPNNGARGLTNGARGPTNGAIGTTNVA-RGPTNEARGPTNVPIGVSLCSCGTT 334
G A G T A G T A G T A G T G T P G + GTT
Sbjct: 751 GGTTAAPGGTTAAPGGTTAAPGGTTAAPGGTTTAPGGTTAAPGGTTAAPGGTT 803
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -2
Query: 489 GPNNGARGLTNGARGPTNGAIG-TTNVARGPTNEARGPTNVPIGVSLCSCGTT 334
G A G T A G T A G TT G T G T P G + GTT
Sbjct: 758 GGTTAAPGGTTAAPGGTTAAPGGTTTAPGGTTAAPGGTTAAPGGTTAAPGGTT 810
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -2
Query: 489 GPNNGARGLTNGARGPTNGAIGTTNVA-RGPTNEARGPTNVPIGVSLCSCGTT 334
G A G T A+G T A G T A G T G T P G + GTT
Sbjct: 716 GGTTAAPGGTTAAQGGTTVAPGGTTAAPGGTTAAPGGTTAAPGGTTAAPGGTT 768
>SB_17997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 168 FKSNLVEVHHT-ISTDNESCIYIKYHEMTC--FFISI*WYLTTIDRSIAFWLYMN 13
F SN+V +H+T I + ES +Y++ C + + W T R I W+ +N
Sbjct: 12 FASNIVSIHYTVIQSHYESLSRFRYYQNVCTPSYSFVWWNWTRWQREID-WMALN 65
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +1
Query: 364 YRYVGRASRLVGRASRNVGRAYRSVGRTSRSVGQASRPVVRAYRTSA 504
YR R R R YR+ R+ RP YRT A
Sbjct: 730 YRPYAHVYRTYAHVYRTYARVYRTYAHVYRTYAHVYRPYAHVYRTYA 776
>SB_25222| Best HMM Match : Flagellin_C (HMM E-Value=0.72)
Length = 418
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 355 GDAYRYVGRASRLVGRASRNVGRAYRSVGRTSRSVGQASRPVVRA 489
G+A +G A+ +G A+ +G+A +G+ +G+A+ + A
Sbjct: 91 GEAANGLGAAANGLGEAANGLGKAANGLGKAVNGLGKAANGLEEA 135
>SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8)
Length = 355
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 480 NGARGLTNGARGPTNGAIGTTNVARGPTNEARGPTNVPI-GVSLCSCGTTLTSPP 319
N AR T+G RGP+N P A G VPI G S + T PP
Sbjct: 203 NQARRTTSGRRGPSNNFSNNFGTPATPATPANG---VPIAGPSGMATPGAFTPPP 254
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,716,455
Number of Sequences: 59808
Number of extensions: 269455
Number of successful extensions: 1173
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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