Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_P03
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   0.98 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   2.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.0  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   4.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   4.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   4.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   5.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   6.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.9  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   6.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.2  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 0.98
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -3

Query: 250 PLLST*SG*IS--TNYPFYP*RNQLSCSCAYHNRF 152
           P+LST +   +   NYP+Y   + LS S   H++F
Sbjct: 241 PVLSTTNSTTNCYNNYPYYSNMDYLSSSTMSHSQF 275


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 144 SHLDRIVFIHRVITERF 94
           S+LD+  FIHR + + F
Sbjct: 330 SNLDKDAFIHRTVDDYF 346


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 204 FTLDEINCHVRVHIIIGFTDSHLD 133
           FT+D I+ ++  HII  F     D
Sbjct: 43  FTVDHIDPYLCTHIIYSFVGLQAD 66


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 250 DALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDD 369
           DAL+  +D  ++ + D      +H    +ER  +D  DDD
Sbjct: 161 DALVSDSDDREKDEEDKRDDTDMHGRIKSERNGKDLDDDD 200


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -1

Query: 162 IIGFTDSHLDRIVFIHRVITERFQRFVLVFL 70
           ++G++ ++    +F++  I   F  FVLVF+
Sbjct: 112 LLGYSINYRRISIFVNLAILGVFGEFVLVFV 142


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 VKPIMICTRT*QLISSRVKWI 211
           + P  IC    QLI   V+W+
Sbjct: 194 INPSAICESAAQLIFMNVQWV 214


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 38  LWTRRFYSDQRRNTR 82
           LWTRR Y+ +++ +R
Sbjct: 60  LWTRRRYAGRKKLSR 74


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 193 VKGKMDNWLKFN-HFKSTIKDALIKLN 270
           VKGK+  W++F+  +K  +   L+ L+
Sbjct: 166 VKGKLQCWIEFHPQWKWQVYMTLVSLS 192


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +2

Query: 344 SVRTILTMIGSTSLDSFTISERLWPSTRSRNG 439
           + +  L+ +   SL  +T   +LW     RNG
Sbjct: 37  ATKITLSSLAKGSLKQYTCELKLWWEFCQRNG 68


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 332 QRSGSVRTILTMIGSTSLDSFTI 400
           +RSG  RT    + STS+ ++ I
Sbjct: 69  ERSGKGRTTFRWLSSTSIYAYFI 91


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 332 QRSGSVRTILTMIGSTSLDSFTI 400
           +RSG  RT    + STS+ ++ I
Sbjct: 69  ERSGKGRTTFRWLSSTSIYAYFI 91


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 426 LVEGHNLSEIVNESNEVEPIIVRMVLTDPLR 334
           ++E    + I N  NE++ +I+  +  DP R
Sbjct: 41  IMEKRRRARINNSLNELKTLILDAMKKDPAR 71


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 149 VKPIMICTRT*QLISSRVKWI 211
           + P  IC    QL+   V+W+
Sbjct: 194 INPSAICESAAQLLFMNVQWV 214


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 316 QCSAS*CPDRIHRPNR 269
           +C    C + +HRP R
Sbjct: 88  ECPEPTCDEPVHRPGR 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,532
Number of Sequences: 336
Number of extensions: 2426
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)