Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P03
(444 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19406| Best HMM Match : DUF706 (HMM E-Value=2.8e-31) 149 8e-37
SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.026
SB_14324| Best HMM Match : Ank (HMM E-Value=1.7e-28) 30 0.75
SB_26203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.99
SB_57338| Best HMM Match : VWA (HMM E-Value=1.2) 29 1.3
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 1.7
SB_11581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38) 29 2.3
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10) 28 4.0
SB_54916| Best HMM Match : TB2_DP1_HVA22 (HMM E-Value=4.76441e-44) 27 5.3
SB_8915| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 27 7.0
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 27 7.0
SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013) 27 9.2
>SB_19406| Best HMM Match : DUF706 (HMM E-Value=2.8e-31)
Length = 203
Score = 149 bits (362), Expect = 8e-37
Identities = 73/150 (48%), Positives = 98/150 (65%), Gaps = 12/150 (8%)
Frame = +1
Query: 31 VSVMDPSLLLRPEEKYE------------DKPLEAFRDYTVDENDPIKMRVRKTYYDMHT 174
+ + DPS L RPEE+Y+ DK E FR+Y ++ + VR+TY MH
Sbjct: 24 IVLTDPSQLHRPEEQYQEFNKKKKEISRTDKSKEEFRNYNINLQTDV---VRETYKLMHK 80
Query: 175 NMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIRED 354
TV+FV+ K+ W + + T+ +A+ L+ LVDESDPDT+LPN HAFQTAERIR D
Sbjct: 81 YQTVEFVQQKIKKWGSLSKTEMTVMEAVFMLDALVDESDPDTDLPNSAHAFQTAERIRAD 140
Query: 355 HPDDDWFHLIGLIHDLGKVMAFYEEPQWCV 444
HPD DWF L+GL+HD+GKV+A + +PQWCV
Sbjct: 141 HPDKDWFQLVGLLHDMGKVLALWGDPQWCV 170
>SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 35.1 bits (77), Expect = 0.026
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 106 DYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDE 285
+Y + NDP+ + + +T+ D+V + D+W+ F+H D K+N+ +
Sbjct: 259 NYGLSTNDPLSIGILLIILVFNTSNNNDYVSDESDDWVPFDH------DGRRKINNNYES 312
Query: 286 SDPDTN-LPNIVHAFQTAERIREDHP 360
D DT+ L ++ E + D P
Sbjct: 313 YDSDTSMLSDLDGESDEEEEVNRDAP 338
>SB_14324| Best HMM Match : Ank (HMM E-Value=1.7e-28)
Length = 631
Score = 30.3 bits (65), Expect = 0.75
Identities = 21/94 (22%), Positives = 43/94 (45%)
Frame = +1
Query: 34 SVMDPSLLLRPEEKYEDKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDN 213
++ P+L +RP +KY+ + A R Y ++ P + + D + +K +
Sbjct: 510 ALQKPTLEIRPNQKYDW--ITAIRAYGIELKSPPEPSPHMSAGDPLKDDATMVLKQQR-- 565
Query: 214 WLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNI 315
++ +STI + LN + D+ T +PN+
Sbjct: 566 -MRIKELQSTINQQTVLLNSICDQLQKLTGVPNM 598
>SB_26203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.9 bits (64), Expect = 0.99
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 114 RVITERFQRFVLVFLLWSE*KRRVHNGHR 28
R++ F RFV FL W + K+ +GHR
Sbjct: 56 RIVVHYFLRFVFFFLGWWKVKQNARDGHR 84
>SB_57338| Best HMM Match : VWA (HMM E-Value=1.2)
Length = 333
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -1
Query: 210 IHFTLDEINCHVRVHIIIGFTDSHLDRIVFIHRVITERFQ 91
IH T NC R H G TD H VF HR++TE F+
Sbjct: 260 IHCT--SFNCDDRFHRCQGDTDGH----VFAHRLLTEGFR 293
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.1 bits (62), Expect = 1.7
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
Frame = +1
Query: 79 EDKPLEAFRDYTVDE--NDPIKMRVRKTYYD---MHTNMTVDFVKGKMDNWLKFNHFKST 243
E K L A +++ ND +K+++R D N + ++ K +N L ++
Sbjct: 1209 EQKKLNANYQKDIEDLLNDIVKLKMRGMDDDGTEEMENQIREELEVKQENKLLQEQVENL 1268
Query: 244 IKDALIKLNDLVDESDPDTNLP----NIVHAFQTAERIREDHPDDDW 372
IKD + D D+S N+ + + ++ E+ PDDDW
Sbjct: 1269 IKDNALLQKDNTDKSTEIQNMELEIKRLENIVSDLQKELENRPDDDW 1315
>SB_11581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 148 RKTYYDMHTNMTVDFVKGKMDNWLKFNH 231
R+ Y + +TN D+V + D+W+ F+H
Sbjct: 5 RRRYRNTNTNNKNDYVSDESDDWVPFDH 32
>SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38)
Length = 1523
Score = 28.7 bits (61), Expect = 2.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 118 PPCNHGTLPTVCPRIS 71
PPC+ GTLP +C + S
Sbjct: 33 PPCSEGTLPEICKKTS 48
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 160 YDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAE 339
YD + N D V+ + F+ T+ A IK +DE ++ PN + E
Sbjct: 307 YDTNKNDEGDAVQHPVHTTTNSVCFQHTLHTAKIKAGH-IDEPTHSSSFPNRLQGTAQVE 365
Query: 340 RIREDHPDD 366
R+ + P++
Sbjct: 366 RLEQQQPEE 374
>SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10)
Length = 262
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/73 (23%), Positives = 27/73 (36%)
Frame = +1
Query: 10 KIKPESPVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVD 189
K PE + DPS + E + D + E P + V T M
Sbjct: 105 KRTPEKRIQKSDPSPGILSNEDFTDLDYNTMMASLIGEEQPPLIAVSDTPAIMEVESLCS 164
Query: 190 FVKGKMDNWLKFN 228
++G +D +K+N
Sbjct: 165 LIRGGVDEDVKYN 177
>SB_54916| Best HMM Match : TB2_DP1_HVA22 (HMM E-Value=4.76441e-44)
Length = 210
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 235 KSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDD 369
+S I L K+ + +D+ + +LP +VH E IR P D
Sbjct: 155 QSQIDSTLEKVGEKMDKYAKEADLPRLVHGSCLVEWIRHSVPKGD 199
>SB_8915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.5 bits (58), Expect = 5.3
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Frame = +1
Query: 16 KPESPVSVMDPSLLLRPEEKYEDKPLEAFRD-YTVDENDPIKMRVRK--TYY----DMHT 174
KP SP S+ S + + E K + F D Y ++ D ++ + K YY D +
Sbjct: 140 KP-SPSSIDFDSKKVAEYQSSEGKKIFVFDDLYDKEDLDNLRAHILKYGVYYFDDSDDNE 198
Query: 175 NMTVDFVKG-KMDNWLKFNHFKSTIKDAL-IKLNDLVDESDPDTNLPNIVHAFQTAERIR 348
+ V ++ G +DN+LK + T + A + ++ D NL I +A T RI
Sbjct: 199 SDNVQWIAGFNIDNYLKSRFWNITHRVATHVSGSNKWFPYDISCNL--IRYADHT--RIH 254
Query: 349 ED--HPDDDWFHLIGLIHDLGK 408
D +D+W HLI L D+ K
Sbjct: 255 HDCNQNEDEWTHLIYLNPDMEK 276
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 16 KPES-PVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDENDPIKMRVRKT 156
KPE P + L +PE+K EDKP E ++ D+ RKT
Sbjct: 25 KPEDKPEDKSEDRLEDKPEDKLEDKPKENQQNKPEDKQQTSPKTSRKT 72
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 10 KIKPE-SPVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDE 123
K PE SP ++ RPEEK EDKP E D D+
Sbjct: 295 KTSPEISPKDKLEDKPEDRPEEKPEDKPEEKPEDNPEDK 333
>SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013)
Length = 872
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 174 RVHIIIGFTDSHLDRIVFIHRVITERFQRFVLVFLLWSE 58
RV +I+ D HLDR + +I V+ +LW++
Sbjct: 238 RVLVIVFHADRHLDRCRSVGYIIESWLVAIVITVVLWTK 276
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,729,422
Number of Sequences: 59808
Number of extensions: 314289
Number of successful extensions: 926
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 871599479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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