Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P03
(444 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g14520.1 68414.m01721 oxygenase-related similar to myo-inosit... 108 1e-24
At2g19800.1 68415.m02313 expressed protein similar to myo-inosit... 103 5e-23
At5g56640.1 68418.m07071 expressed protein similar to myo-inosit... 101 3e-22
At4g26260.1 68417.m03779 expressed protein similar to myo-inosit... 100 9e-22
At1g03760.1 68414.m00356 prefoldin subunit family protein contai... 28 2.5
At5g21900.1 68418.m02539 expressed protein 28 3.3
At2g42955.1 68415.m05326 hypothetical protein 28 3.3
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 28 3.3
At2g04660.1 68415.m00475 E3 ubiquitin ligase, putative E3, ubiqu... 27 4.3
At5g66630.1 68418.m08398 LIM domain-containing protein contains ... 27 7.5
At5g62680.1 68418.m07866 proton-dependent oligopeptide transport... 26 10.0
At4g37030.1 68417.m05245 hypothetical protein 26 10.0
At3g51070.1 68416.m05592 dehydration-responsive protein-related ... 26 10.0
At2g34020.1 68415.m04165 calcium-binding EF hand family protein ... 26 10.0
>At1g14520.1 68414.m01721 oxygenase-related similar to myo-inositol
oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
Length = 311
Score = 108 bits (260), Expect = 1e-24
Identities = 55/118 (46%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Frame = +1
Query: 100 FRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLV 279
FRDY D + V + Y H TVDFV+ + + K N + +I + LN+ +
Sbjct: 51 FRDY--DAESERRRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFI 108
Query: 280 DESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVM---AFYEEPQWCV 444
DESDPD + P I H QTAE IR+D+PD+DW HL GLIHDLGKV+ +F E PQW V
Sbjct: 109 DESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAV 166
>At2g19800.1 68415.m02313 expressed protein similar to myo-inositol
oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
Length = 317
Score = 103 bits (247), Expect = 5e-23
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Frame = +1
Query: 97 AFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDL 276
+FRDY E++ + V + Y H + T DFVK + K N + +I + LN++
Sbjct: 55 SFRDYENGESER-QQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNV 113
Query: 277 VDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMAFYE---EPQWCV 444
VDESDPD + P I H QTAE IR D+PD+DW HL LIHDLGKV+ E PQW V
Sbjct: 114 VDESDPDLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAV 172
>At5g56640.1 68418.m07071 expressed protein similar to myo-inositol
oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
Length = 314
Score = 101 bits (241), Expect = 3e-22
Identities = 59/145 (40%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Frame = +1
Query: 19 PESPVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVK 198
P S +S D + L PE + FRDYT D N + V Y HTN T+DFV+
Sbjct: 30 PMSKIS-SDDEVFLAPEMNAFGRQ---FRDYT-DTNSERQKSVEHFYATQHTNQTLDFVQ 84
Query: 199 GKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFH 378
+ K + I + ++VDESDPD + P I H Q+AE IR+D+P++DW H
Sbjct: 85 KMRSEYGKLDKMVMNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLH 144
Query: 379 LIGLIHDLGKVMA---FYEEPQWCV 444
L LIHDLGKV+ F PQW V
Sbjct: 145 LTALIHDLGKVLTLPQFGGLPQWAV 169
>At4g26260.1 68417.m03779 expressed protein similar to myo-inositol
oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
Length = 317
Score = 99.5 bits (237), Expect = 9e-22
Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Frame = +1
Query: 100 FRDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLV 279
FRDY V+ + V + Y H N TVDFVK + K + +I + LN++V
Sbjct: 57 FRDYDVESER--QKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVV 114
Query: 280 DESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMA---FYEEPQWCV 444
DESDPD + P I H Q+AE IR+D+P++DW HL LIHDLGKV+ F PQW V
Sbjct: 115 DESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAV 172
>At1g03760.1 68414.m00356 prefoldin subunit family protein contains
similarity to Swiss-Prot:O94763 RNA polymerase II
subunit 5-mediating protein (RPB5-mediating protein)
[Homo sapiens]; contains Pfam profile PF02996: Prefoldin
subunit
Length = 391
Score = 28.3 bits (60), Expect = 2.5
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 67 EEKYEDKPLEAFR-DYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKM 207
EEK +K +E R VDEND + V+K +H N+ V F GKM
Sbjct: 27 EEKIGEKRVEMNRLQQYVDENDNLINLVKKLPDQLHHNVMVPF--GKM 72
>At5g21900.1 68418.m02539 expressed protein
Length = 544
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 302 LVSGSDSSTKSFSLMRASFIVDLKWLNFNQLS 207
LVS +D +SF + R+S + DL N N+++
Sbjct: 345 LVSVNDGVVRSFFMFRSSILTDLSLANCNEVT 376
>At2g42955.1 68415.m05326 hypothetical protein
Length = 213
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 327 ESVHNVRQVSVRIGFIDQIVQLDESILYCRLEVVEFQPI 211
+ HNVR + DQ+V LD+ IL + V F+P+
Sbjct: 78 QEFHNVRSRPTHATYADQLVNLDDQILPWK---VHFRPV 113
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 27.9 bits (59), Expect = 3.3
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Frame = +1
Query: 19 PES-PVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDENDPIKMRVRKTYYDMHTNMTVD-- 189
PES P V L +E KP + D+T D ++ K V K+Y + M +D
Sbjct: 563 PESWPERVETVPQWLDSQEGVYGKPAQ--EDFTAD-HERWKTIVSKSYLN---GMGIDWS 616
Query: 190 FVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNI 315
+V+ MD + F + +KD + + ++V PDT LP I
Sbjct: 617 YVRNVMDMRAVYGGFAAALKDLKLWVMNVVPIDSPDT-LPII 657
>At2g04660.1 68415.m00475 E3 ubiquitin ligase, putative E3,
ubiquitin ligase; contains similarity to
anaphase-promoting complex subunit 2 GI:6180009 from
[Homo sapiens]
Length = 865
Score = 27.5 bits (58), Expect = 4.3
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 145 VRKTYYDMHTNM-TVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVH 321
+ KT YD+ T + TV+ LK + +++++ I LNDL+D +T NI
Sbjct: 566 LNKTDYDIDTEIRTVEL--------LKIHFGEASMQRCEIMLNDLIDSKRVNT---NIKK 614
Query: 322 AFQTAERIRED 354
A QT +RE+
Sbjct: 615 ASQTGAELREN 625
>At5g66630.1 68418.m08398 LIM domain-containing protein contains low
similarity to Pfam profile PF00412: LIM domain
Length = 702
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 4 NMKIKPESPVSVMDPSLLLRPEEKYEDKPLEAFRDYTVDE 123
NMKI+ E P+ ++ LL + EEK ++ R Y + E
Sbjct: 490 NMKIEKEFPLILVRKELLNKKEEKIDNHYEVLIRAYCMSE 529
>At5g62680.1 68418.m07866 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 616
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 4 NMKIKPESPVSVMDPSLLLRPEEKY--EDKPLEAFRDYTVDENDPIKMRVR 150
N K+K +D + +L PE+K + KP + ++ T+ + + +K VR
Sbjct: 304 NSKLKYTDQFRFLDKAAILTPEDKLQPDGKPADPWKLCTMQQVEEVKCIVR 354
>At4g37030.1 68417.m05245 hypothetical protein
Length = 519
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 292 PDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGK 408
P +P++VH+ E I+E W H++G GK
Sbjct: 345 PAMLVPSLVHSVSVREAIQEVRMVQIWEHMMGWFEMQGK 383
>At3g51070.1 68416.m05592 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 895
Score = 26.2 bits (55), Expect = 10.0
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +1
Query: 103 RDYTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVD 282
RD+T D + K V K Y + ++ V+ MD + F + +KD + + ++V+
Sbjct: 722 RDFTTDY-EHWKHVVSKVYMN-EIGISWSNVRNVMDMRAVYGGFAAALKDLQVWVMNVVN 779
Query: 283 ESDPDTNLPNI 315
+ PDT LP I
Sbjct: 780 INSPDT-LPII 789
>At2g34020.1 68415.m04165 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 462
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 329 WKACTMFGKLVSGSDSSTKSFSLMRASFIVD 237
W AC +FG SD S + S+ R S D
Sbjct: 177 WGACVIFGLTSPNSDPSIRRGSIKRTSSYFD 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,347,581
Number of Sequences: 28952
Number of extensions: 213440
Number of successful extensions: 634
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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