Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P01
(567 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 40 0.001
01_01_1152 + 9170628-9171899 38 0.007
11_01_0750 - 6315126-6315896,6316371-6316784 32 0.28
05_07_0209 + 28420008-28421510 30 1.5
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 30 1.5
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984... 29 3.4
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559... 29 3.4
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 28 4.5
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852... 28 4.5
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 28 4.5
02_05_0622 + 30437533-30437577,30437694-30438177,30438301-304383... 28 4.5
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 27 7.9
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 27 7.9
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 40.3 bits (90), Expect = 0.001
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 10/146 (6%)
Frame = +2
Query: 158 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDV--DYSEATNPYISLSKTFSEM 331
G DKN+ SPL + + L +GA + +I FLG A +++L +
Sbjct: 29 GGDKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDS 88
Query: 332 NP------DFFTMANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDFSD-TKKAADIINQW 487
P AN ++V L + + +Y++E + F D ++A IN+W
Sbjct: 89 GPGDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEW 148
Query: 488 ANEKTRGHIKSPISDDTIDPNAAAAL 565
T G IK + D +D A L
Sbjct: 149 FESATAGRIKDFLPKDAVDRATPAVL 174
>01_01_1152 + 9170628-9171899
Length = 423
Score = 37.5 bits (83), Expect = 0.007
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Frame = +2
Query: 158 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEA-TNPYISLSKTFSEMN 334
G+ +N + SPL + L GA ++ E+ FLG +E +P L +
Sbjct: 56 GQGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLP 115
Query: 335 PDFFTMANKIYVGNKYTLDEKFT-SSSRQYQSEVETIDF-SDTKKAADIINQWANEKTRG 508
F A ++V L +F +++ +Y + E DF + ++A + +N + ++ T G
Sbjct: 116 NTSF--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEG 173
Query: 509 HIKSPISDDTIDPNAAAAL 565
I+ + +++D + L
Sbjct: 174 LIRDVLPPNSVDSSTVVVL 192
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 353 ANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDFSDTKK-AADIINQWANEKTRGHIKSPI 526
A ++ +L +F + Y S + DF + + A D IN W + T+G + + +
Sbjct: 103 AGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLL 162
Query: 527 SDDTIDPNAAAAL 565
TID N L
Sbjct: 163 PAGTIDQNTGLVL 175
>05_07_0209 + 28420008-28421510
Length = 500
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 239 SRVEIDKFLGDVDYSEATN---PYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSS 409
S +++ + L D D + A + P + + MNP FT+ + NK +L E+FT+S
Sbjct: 279 SVLQLHRLLVDQDAAAAASFPAPIDGVLDWVASMNPRVFTVVEQEADHNKSSLLERFTNS 338
Query: 410 SRQYQSEVETID 445
Y S ++++
Sbjct: 339 LFYYASMFDSLE 350
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = +2
Query: 158 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPY------ISLSKT 319
G +NV SPL + + + L +GAG +R ++ LG +E + + + L+
Sbjct: 32 GAGRNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADA 91
Query: 320 FSEMNPDFFTMANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDF 448
P A+ ++V +L + F + +Y++E ++DF
Sbjct: 92 SGAGGPR-VAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
>08_01_0978 +
9841441-9842169,9842303-9842590,9842768-9843612,
9843941-9844223,9844303-9844416
Length = 752
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 398 FTSSSRQYQSEVETIDFSDTKKA-ADIINQWANEKTRGHIKSPISDDTID-PNAA 556
+ ++ E E + S+T++ ADI QWA R +K SD+T+ PN A
Sbjct: 182 YAGKQAEWDKEDEAVAESNTQQVLADIPVQWARNWARARVKKN-SDETLSFPNPA 235
>06_03_0813 -
24853119-24854480,24854711-24855442,24855556-24855962,
24856091-24856359,24856681-24856733,24857019-24857078,
24857309-24857363,24858080-24858155,24858225-24858801
Length = 1196
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 553 CIWIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNL 428
CIW YG I+ + F++ + + I+ L+ +S GI V L
Sbjct: 434 CIWHYGTIKKYEFDLQNKVSINWLLG-LSPNLGIVRVRGIGL 474
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 488 ANEKTRGHIKSPISDDTIDPNAAAA 562
A + RG KSP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
>10_05_0047 +
8524345-8524414,8524687-8524776,8525004-8525306,
8525413-8525872,8525962-8526043,8526157-8526351
Length = 399
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 272 VDYSEATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETI 442
++ E N K E N D T NK+ ++ T +EK S+ R+ + + E I
Sbjct: 331 MELKEGDNSERKREKALEEYN-DEITRINKVAAASRLTAEEKRRSAERKVREKAERI 386
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 553 CIWIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNL 428
C+W YG + + F++ + + IS L+N + GI V L
Sbjct: 494 CVWHYGTKKKYEFDVQNKVSISWLLN-IGPSLGIVRVRGIGL 534
>02_05_0622 +
30437533-30437577,30437694-30438177,30438301-30438354,
30438565-30438789,30438891-30438943,30439591-30439714,
30439823-30440077,30440171-30440517,30440661-30441266,
30441504-30441546,30441624-30441757
Length = 789
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 553 CIWIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNL 428
C+W YG I+ + F+ + + ++ L+N + GI V L
Sbjct: 484 CVWHYGTIKKYEFDFQNKVSVNWLLN-LGPSLGIVRVRGIGL 524
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 27.5 bits (58), Expect = 7.9
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Frame = +2
Query: 176 VSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYIS---LSKTFSEMNPDFF 346
V +G + S G S V D G++ P +S SK S D +
Sbjct: 509 VDIAVGCAEALACMHSNIGHKSVVHGDVKSGNILLGNNLEPKVSDFGSSKLMSVAKSDNW 568
Query: 347 T-MANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSDTKKA 466
+ MA+K Y+ Y +FT S Y V ++ KKA
Sbjct: 569 SVMADKSYIDPAYIKTGRFTEKSDVYSFGVVLLELITRKKA 609
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Frame = +2
Query: 287 ATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSD---- 454
A N + L + ++ FT +K+ G+ T ++ S + S T+ ++
Sbjct: 685 ANNGALLLRQFVQTLSGPAFTWYSKLAPGSIRTWEQMQDSFLEHFYSTQRTVGITELTQT 744
Query: 455 ----TKKAADIINQWANEKTRGHIKSPISD 532
+KAAD IN+W N H PI++
Sbjct: 745 EQRANEKAADFINRWRNLSL--HCPQPITE 772
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,946,854
Number of Sequences: 37544
Number of extensions: 297298
Number of successful extensions: 796
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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