Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P01
(567 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 43 2e-04
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 39 0.002
At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing ... 31 0.54
At3g25140.1 68416.m03139 glycosyl transferase family 8 protein c... 29 2.9
At4g36160.1 68417.m05146 no apical meristem (NAM) family protein... 28 3.8
At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 28 3.8
At5g39785.2 68418.m04819 expressed protein 28 5.0
At5g39785.1 68418.m04818 expressed protein 28 5.0
At4g04010.1 68417.m00571 Ulp1 protease family protein contains P... 28 5.0
At2g20580.1 68415.m02404 26S proteasome regulatory subunit S2 (R... 28 5.0
At1g23110.1 68414.m02889 hypothetical protein 27 6.6
At4g28470.1 68417.m04073 26S proteasome regulatory subunit, puta... 27 8.7
At4g13330.1 68417.m02083 expressed protein 27 8.7
At3g43600.1 68416.m04639 aldehyde oxidase, putative identical to... 27 8.7
At1g70900.1 68414.m08181 expressed protein 27 8.7
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 8.7
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Frame = +2
Query: 107 DAIDKTSMKLLKEAYTSGKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSE 286
+ + + + K+++ +G NVV SP+ + +L+ L +G+ ++ EI FL
Sbjct: 12 NVVARLAKKVIETDVANGS--NVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDH 69
Query: 287 ATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDFSDTK- 460
++ +E + + A+ +++ L F Y++ +DF+ TK
Sbjct: 70 LNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFA-TKP 128
Query: 461 -KAADIINQWANEKTRGHIKSPISDDTID 544
+ D +N WA+ T G IK +S D D
Sbjct: 129 VEVIDEVNIWADVHTNGLIKQILSRDCTD 157
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 39.1 bits (87), Expect = 0.002
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Frame = +2
Query: 152 TSGKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKF--LGDVDYSEAT-NPYISLSKTF 322
T N+V SP+ + +L+ L +G+ ++ +I F L DY A +S++
Sbjct: 24 TVANGSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLAKTVSVALND 83
Query: 323 SEMNPDF-FTMANKIYVGNKYTLDEKFTSS-SRQYQSEVETIDFSDTKKAADI--INQWA 490
D + A +++ + F Y + +DF+ TK A I +N WA
Sbjct: 84 GMERSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFA-TKPAEVINEVNAWA 142
Query: 491 NEKTRGHIKSPISDDTI 541
T G IK +SDD+I
Sbjct: 143 EVHTNGLIKEILSDDSI 159
>At3g55340.1 68416.m06146 RNA recognition motif (RRM)-containing
protein low similarity to nucleolar phosphoprotein
(Nopp52), Tetrahymena thermophila, EMBL:TT51555;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 597
Score = 31.1 bits (67), Expect = 0.54
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 254 DKFLGDVDYSEATNPYISLSKTFSEMNPDFFTMANKIYVGN 376
D++L Y + T P I KT S P+ N++Y+GN
Sbjct: 228 DRYLTIQQYVKTTTPSIPRRKTSSGFAPEMVDGYNRVYIGN 268
>At3g25140.1 68416.m03139 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 559
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +2
Query: 170 NVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYISLSKTFSEMNPDFFT 349
+VV+ + + + +++K +G+ VE+ DY+ + Y+ + K N F
Sbjct: 281 HVVTDKMNLGAMQVMFKLKEYKGAHVEVKAV---EDYTFLNSSYVPVLKQLESANLQKFY 337
Query: 350 MANKIYVGNKYTLDEKF 400
NK+ K T + KF
Sbjct: 338 FENKLENATKDTTNMKF 354
>At4g36160.1 68417.m05146 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) [Arabidopsis thaliana];
contains Pfam PF02365 : No apical meristem (NAM) protein
Length = 377
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 65 FYFFDHEYNRTALGDAIDKTSMKLLKEAYTSGKDKNVV--SSPLGVMMLMLLYKSGAGEG 238
+YFF H+ + G ++ +M +A +G+DK V S +G+ ++ YK A G
Sbjct: 69 WYFFSHKDKKYPTGTRTNRATMAGFWKA--TGRDKAVYDKSKLIGMRKTLVFYKGRAPNG 126
Query: 239 SRVE 250
+ +
Sbjct: 127 QKTD 130
>At1g76740.1 68414.m08931 expressed protein weak similarity to
fimbriae-associated protein Fap1 (GI:3929312)
[Streptococcus parasanguinis]; weak similarity to 1MDa_1
protein (GI:24620455) [Caenorhabditis elegans]
Length = 1532
Score = 28.3 bits (60), Expect = 3.8
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +2
Query: 206 MLLYKSGAGEGSRVEIDKFLGDVDYSEATNPY-ISLSKTFSEMNPDFFTMANKIYVGNKY 382
+LL SG G E G D EA P I+ K S + PD T+ N + N+
Sbjct: 1383 LLLNSSGGGSNVSGETSILAGTADEDEAAGPIAIAFVKAMS-LTPDELTVKNHM---NEK 1438
Query: 383 TLDEKFTSSSRQYQSEVETIDFSDTKKAADIINQWA 490
DE+ + E + S+ +K I++ A
Sbjct: 1439 AADEEMITRETTPIPEETINESSENRKEYSSIDESA 1474
>At5g39785.2 68418.m04819 expressed protein
Length = 607
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +2
Query: 257 KFLGDVDYSEATNPYISLSKTFSEMNPDFFT-----MANKIYVGNKYTLDEKFTSSSRQY 421
+FL + D+ E+ + ++ S+TF+ + D F + G D + S +
Sbjct: 135 RFLTEEDFLESDSDFVDSSQTFTSNDEDGFLSDSDFAETSLKKGQNRKSDNSGSGSDSEE 194
Query: 422 QSEVETIDFSDTKKAADIINQ 484
+ E +T F + D+I Q
Sbjct: 195 EEEEDTNGFESLWEHQDLIEQ 215
>At5g39785.1 68418.m04818 expressed protein
Length = 606
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +2
Query: 257 KFLGDVDYSEATNPYISLSKTFSEMNPDFFT-----MANKIYVGNKYTLDEKFTSSSRQY 421
+FL + D+ E+ + ++ S+TF+ + D F + G D + S +
Sbjct: 135 RFLTEEDFLESDSDFVDSSQTFTSNDEDGFLSDSDFAETSLKKGQNRKSDNSGSGSDSEE 194
Query: 422 QSEVETIDFSDTKKAADIINQ 484
+ E +T F + D+I Q
Sbjct: 195 EEEEDTNGFESLWEHQDLIEQ 215
>At4g04010.1 68417.m00571 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At2g06430,
At2g15140, At2g04980, At2g14130, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 836
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +2
Query: 302 ISLSKTFSEMNPDFFTMANKIYVGNKY--TLDE---KFTSSSRQYQSE 430
+ L KT E NP+ F + ++VG+ + +DE +F + +QSE
Sbjct: 646 LELMKTRKESNPELFKNKSVVFVGSSFLNVIDESDMEFLDNKEGFQSE 693
>At2g20580.1 68415.m02404 26S proteasome regulatory subunit S2
(RPN1) contains an APC-complex (cyclosome) and
proteasome component repeat ( PS50248)
Length = 891
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 493 ISPLINDVSCFFGIAEVNSFNLALVLTGRAREFLIQSIFISDVD 362
+SP++ND + S +L ++ G E + QSI + +D
Sbjct: 506 LSPILNDAKAPLDVIAFASLSLGMIYVGSCNEEVAQSIIFALMD 549
>At1g23110.1 68414.m02889 hypothetical protein
Length = 261
Score = 27.5 bits (58), Expect = 6.6
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 167 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYISLSKTFSEMNPDFF 346
K +S +GV + LY + SR ++ K+L VDY+ I LS+ NP F
Sbjct: 120 KVYANSLIGVGIASSLYHA-----SRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFL 174
Query: 347 TMANKI 364
A+ +
Sbjct: 175 MAASAL 180
>At4g28470.1 68417.m04073 26S proteasome regulatory subunit,
putative contains Pfam domain PF01851:
Proteasome/cyclosome repeat
Length = 1103
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -3
Query: 493 ISPLINDVSCFFGIAEVNSFNLALVLTGRAREFLIQSIFISDVD 362
+SP++ND + + + +L ++ G E + QSI + +D
Sbjct: 549 LSPILNDANAPLDVIAFAALSLGMIYVGSCNEEVAQSIIFALMD 592
>At4g13330.1 68417.m02083 expressed protein
Length = 428
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 119 YQWRHLRLSCCTRGQRNRMLARCR 48
YQWR LR + TR +++A CR
Sbjct: 114 YQWRSLRFNDDTRQSTVKVMAACR 137
>At3g43600.1 68416.m04639 aldehyde oxidase, putative identical to gi:
3172025; identical to cDNA putative aldehyde oxidase
(AO3) mRNA, partial cds GI:2792303
Length = 1321
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 203 LMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYISLSKTFSEMN 334
L L YK GAGE + V S +S+ + F+E N
Sbjct: 942 LALFYKDGAGEPHEYTLSSMWDKVGVSSKFEERVSVVREFNESN 985
>At1g70900.1 68414.m08181 expressed protein
Length = 244
Score = 27.1 bits (57), Expect = 8.7
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 167 KNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYISLSKTFSEMNPDFF 346
K +S +GV + LY S SR + K+L DY+ I L++ E NP F
Sbjct: 103 KVYANSLIGVGIASSLYHS-----SRGKFRKYLRWADYTMIATATICLTRALREENPKFL 157
Query: 347 TMANKI 364
A+ +
Sbjct: 158 MAASAL 163
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 288 ASL*STSPKNLSISTRLPSPAPDL*RSISIITPNGEDTTF 169
+SL +SP LS+S P P P +S ++P+ +T+
Sbjct: 100 SSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSSSSSTY 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,053,739
Number of Sequences: 28952
Number of extensions: 244027
Number of successful extensions: 736
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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