Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O24
(378 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.14c |||adenosine 5'-monophosphoramidase|Schizosaccharom... 50 2e-07
SPCC4G3.02 |aph1||bis|Schizosaccharomyces pombe|chr 3|||Manual 45 5e-06
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 31 0.045
SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces p... 29 0.24
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 27 0.98
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 26 1.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 2.3
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 25 3.9
SPBC28F2.06c |mdm12||Mdm10/Mdm12/Mmm1 complex subunit Mdm12|Schi... 25 3.9
SPBP4H10.20 |nhm1|DcpS|m7G|Schizosaccharomyces pombe|chr 2|||Manual 25 3.9
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 25 3.9
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 25 5.2
SPAC29A4.20 |||RNA polymerase II elongator complex, histone acet... 25 5.2
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 25 5.2
SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyc... 25 5.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 24 6.9
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 24 9.1
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 24 9.1
>SPCC1442.14c |||adenosine
5'-monophosphoramidase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 133
Score = 49.6 bits (113), Expect = 2e-07
Identities = 28/100 (28%), Positives = 54/100 (54%)
Frame = +2
Query: 50 IFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLGHL 229
IF KI++ +IP + E +AF D+ P + H LVIP++ +++ + DE +
Sbjct: 4 IFCKIVKGDIPCVKLAETALSLAFLDIAPTSKGHALVIPKEHAAKMHELSDES---CADI 60
Query: 230 LIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVL 349
L + +KV + + + ++ N+G+ Q V H+H H++
Sbjct: 61 LPLVKKVT--KAIGPENYNVLQNNGRIAHQFVDHVHFHII 98
>SPCC4G3.02 |aph1||bis|Schizosaccharomyces pombe|chr 3|||Manual
Length = 182
Score = 44.8 bits (101), Expect = 5e-06
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +2
Query: 77 IPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLGHLLIVARKV-- 250
+ ++ Y AF ++ P P H+LVIP++ + +L D L L RKV
Sbjct: 12 VGSQVFYRTKLSAAFVNLKPILPGHVLVIPQRAVPRLK---DLTPSELTDLFTSVRKVQQ 68
Query: 251 ATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVLGGRQLEW 370
++ S + I DG + Q+V H+HVH++ ++ ++
Sbjct: 69 VIEKVFSASASNIGIQDGVDAGQTVPHVHVHIIPRKKADF 108
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.045
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = -2
Query: 377 REATPIDVHPGRERASDIRSVPHSCHHLLLN------GNQTCPAPPGLPPYERQ 234
+E +D P RER RS H+ HH + N GN+ P+ +PP E Q
Sbjct: 244 KERYNVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTPGNEALPSHSSVPPNEDQ 297
>SPCC18.09c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 232
Score = 29.1 bits (62), Expect = 0.24
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 92 VYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLGHLLIVARKVATQEGLD 271
+Y DD V D+ P++ H+L++ R P L+ E ++ H +V + V+ +G D
Sbjct: 52 IYYDDDVVLVRDMFPKSKMHLLLMTRDP--HLTHV-HPLEIMMKHRSLVEKLVSYVQG-D 107
Query: 272 KSGFRLVINDGKN 310
SG L+ ++ +N
Sbjct: 108 LSG--LIFDEARN 118
>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 27.1 bits (57), Expect = 0.98
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 305 CHHLLLNGNQTCPAPPGLPPYERQSTD 225
C +LLN + CP+ G+ Y+ TD
Sbjct: 200 CSDVLLNDDSNCPSKKGINNYQYPRTD 226
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 1.7
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 362 IDVHPGRE-RASDIRSVPHSCHHLLLNGNQTCP 267
IDVH G + ++ + H C HLL G + P
Sbjct: 50 IDVHIGSQSNPRELLGLAHFCEHLLFMGTKKYP 82
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 2.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 284 GNQTCPAPPGLPPYERQSTDDP 219
GN T P P +PP ST P
Sbjct: 295 GNSTTPVTPTVPPTSTSSTSTP 316
Score = 25.8 bits (54), Expect = 2.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 284 GNQTCPAPPGLPPYERQSTDDP 219
GN T P P +PP ST P
Sbjct: 349 GNSTTPVTPTVPPTSTSSTSTP 370
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.0 bits (52), Expect = 3.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 269 PAPPGLPPYERQSTDDPATAHLHLQL*KAVKL 174
PAP G YE+Q+ D+P +L L K V++
Sbjct: 523 PAPEGKLFYEKQTGDNPYLKYLLLDPSKHVEI 554
>SPBC28F2.06c |mdm12||Mdm10/Mdm12/Mmm1 complex subunit
Mdm12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 273
Score = 25.0 bits (52), Expect = 3.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 377 REATPIDVHPGRERASDIRSVPH 309
R +TP+D H R+R++D + H
Sbjct: 132 RPSTPMDNHQERDRSNDFQVTAH 154
>SPBP4H10.20 |nhm1|DcpS|m7G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 304
Score = 25.0 bits (52), Expect = 3.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 236 VARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVL 349
V +V Q +DK+ ++ ++ S YHLHVH+L
Sbjct: 215 VLTEVPKQFSVDKNQLKMFVHY----LPSYYHLHVHIL 248
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.0 bits (52), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 322 ALCPILAIIYY*TETRLVQPLLGCHLTS 239
A P +Y+ TRL++P+L HL S
Sbjct: 300 AFLPAFYDVYFQCRTRLLKPVLDYHLKS 327
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 24.6 bits (51), Expect = 5.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 317 VPHSCHHLLLNGNQTCPAPPGLP 249
VPH H L +TC PG+P
Sbjct: 365 VPHLIEHGLGTLRETCKLTPGIP 387
>SPAC29A4.20 |||RNA polymerase II elongator complex, histone
acetyltransferase subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 544
Score = 24.6 bits (51), Expect = 5.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 314 PHSCHHLLLNGNQTCPAPPGLP 249
PH C H+ + GN C PG P
Sbjct: 93 PHRCPHIAMTGN-VCVYCPGGP 113
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 24.6 bits (51), Expect = 5.2
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 229 VDCRS*GGNPGGAGQ-VWFPFSNK*WQEWGTERISLAR 339
+D +S G N GA Q V F + WQ W TE SL +
Sbjct: 750 LDLKS-GKNHAGANQYVLFEDTPLSWQAWDTEVFSLEK 786
>SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 572
Score = 24.6 bits (51), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 281 FRLVINDGKNGAQSVYHLHVHVLGGRQLEWP 373
F L + KN S+ +H+ + G+QLE+P
Sbjct: 182 FELPPSQLKNYKDSISTVHIGLQNGQQLEYP 212
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 24.2 bits (50), Expect = 6.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 306 LPSFITKRKPDLSSPSWVATLRATIN 229
L SF+ + P SSPS T+ IN
Sbjct: 50 LQSFVPPQPPSSSSPSTTGTVAVPIN 75
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 23.8 bits (49), Expect = 9.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2
Query: 341 ERASDIRSVPHSCHHLLLNGNQTCPAPPGLPPYERQS 231
E+ I SVP S L P P + P+E+ S
Sbjct: 1214 EKVIPILSVPVSTFETALGEQPQAPVVPNVKPFEKLS 1250
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 23.8 bits (49), Expect = 9.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 175 WLPGYHKDMGW 143
W+PG HKD W
Sbjct: 690 WMPGTHKDDEW 700
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,752,168
Number of Sequences: 5004
Number of extensions: 36640
Number of successful extensions: 117
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 122233080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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