Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O24
(378 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g56490.1 68416.m06282 zinc-binding protein, putative / protei... 139 5e-34
At1g31160.1 68414.m03812 zinc-binding protein, putative / protei... 134 2e-32
At5g48545.1 68418.m06002 histidine triad family protein / HIT fa... 63 7e-11
At4g16566.1 68417.m02507 histidine triad family protein / HIT fa... 52 1e-07
At5g58240.2 68418.m07291 bis(5'-adenosyl)-triphosphatase, putati... 45 2e-05
At5g58240.1 68418.m07292 bis(5'-adenosyl)-triphosphatase, putati... 45 2e-05
At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family pr... 32 0.15
At5g64940.2 68418.m08169 ABC1 family protein contains Pfam domai... 30 0.44
At5g64940.1 68418.m08168 ABC1 family protein contains Pfam domai... 30 0.44
At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containi... 28 2.4
At2g17600.1 68415.m02036 DC1 domain-containing protein contains ... 27 3.1
At5g56570.1 68418.m07059 hypothetical protein similar to unknown... 27 4.1
At1g13730.1 68414.m01612 nuclear transport factor 2 (NTF2) famil... 27 4.1
At2g15860.1 68415.m01818 expressed protein and genefinder 27 5.5
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 26 7.2
At1g42400.1 68414.m04890 hypothetical protein includes At2g10370... 26 7.2
At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to ... 26 9.6
At3g14350.3 68416.m01816 leucine-rich repeat transmembrane prote... 26 9.6
At3g14350.2 68416.m01814 leucine-rich repeat transmembrane prote... 26 9.6
At3g14350.1 68416.m01815 leucine-rich repeat transmembrane prote... 26 9.6
At2g26110.1 68415.m03133 expressed protein 26 9.6
At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ... 26 9.6
>At3g56490.1 68416.m06282 zinc-binding protein, putative / protein
kinase C inhibitor, putative similar to 14 kDa
zinc-binding protein (Protein kinase C inhibitor, PKCI)
[Zea mays] Swiss-Prot:P42856
Length = 147
Score = 139 bits (337), Expect = 5e-34
Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 3/126 (2%)
Frame = +2
Query: 8 EVELAKSAAPGGD-TIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIP--RKPI 178
E E A +A P TIF KI+ KEIP+ V+EDD+ +AF D+ PQ P HIL+IP R +
Sbjct: 22 EKEAALAATPSDSPTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPKVRDGL 81
Query: 179 SQLSKAGDEDEQLLGHLLIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVLGGR 358
+ LSKA + +LG LL A+ VA QEGL + GFR+VINDG G QSVYH+HVH++GGR
Sbjct: 82 TGLSKAEERHIDILGRLLYTAKLVAKQEGLAE-GFRIVINDGPQGCQSVYHIHVHLIGGR 140
Query: 359 QLEWPP 376
Q+ WPP
Sbjct: 141 QMNWPP 146
>At1g31160.1 68414.m03812 zinc-binding protein, putative / protein
kinase C inhibitor, putative similar to 14 kDa
zinc-binding protein (Protein kinase C inhibitor, PKCI)
[Zea mays] Swiss-Prot:P42856
Length = 187
Score = 134 bits (324), Expect = 2e-32
Identities = 65/121 (53%), Positives = 84/121 (69%), Gaps = 2/121 (1%)
Frame = +2
Query: 20 AKSAAPGGDTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIP--RKPISQLSK 193
A A G TIF KI+ KEIP+ VYED+ +AF D+NPQAP H+LVIP R ++ L K
Sbjct: 67 ASVADTGAPTIFDKIIAKEIPSDIVYEDENVLAFRDINPQAPVHVLVIPKLRDGLTSLGK 126
Query: 194 AGDEDEQLLGHLLIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVLGGRQLEWP 373
A ++LG LL ++ VA +EG+ GFR+VIN+G QSVYHLH+HVLGGRQ++WP
Sbjct: 127 AEPRHVEVLGQLLHASKIVAEKEGI-LDGFRVVINNGVEACQSVYHLHLHVLGGRQMKWP 185
Query: 374 P 376
P
Sbjct: 186 P 186
>At5g48545.1 68418.m06002 histidine triad family protein / HIT
family protein contains Pfam profile PF01230:HIT domain;
contains Prosite motif PS00892: HIT family signature.
Length = 197
Score = 62.9 bits (146), Expect = 7e-11
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 23 KSAAPGGDTIFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGD 202
+S+ D +F KI+R E P +YEDD C+ D NP + H L+IP+ L +
Sbjct: 42 ESSTLQNDCVFCKIIRGESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPP 101
Query: 203 E-DEQLLGHLLIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVHVL 349
+ + +++ + G D F L++N+G Q ++H H+H++
Sbjct: 102 SVVAAMCSKVPLISNAIVKATGSD--SFNLLVNNGAAAGQVIFHTHIHII 149
>At4g16566.1 68417.m02507 histidine triad family protein / HIT
family protein contains Pfam domain, PF01230: HIT family
(histidine triad protein family)
Length = 146
Score = 52.4 bits (120), Expect = 1e-07
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +2
Query: 50 IFGKILRKEIPAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLS--KAGDEDEQLLG 223
IF +I+R + ++ D++ +AF D+ P A H LVIP++ I ++ + DED L+
Sbjct: 9 IFCEIVRNPTTTRLLHTDEKVIAFQDIKPAAQRHYLVIPKEHIPTVNDLQRRDEDYSLVR 68
Query: 224 HLLIVARKVATQEGLDKSGFRLVINDGKNGAQSVYHLHVH 343
H+L V +++ Q+ +S R + + SV HLH+H
Sbjct: 69 HMLSVGQQL-LQKDAPQSIHRFGFH--QPPFNSVDHLHLH 105
>At5g58240.2 68418.m07291 bis(5'-adenosyl)-triphosphatase, putative
similar to bis(5'-adenosyl)-triphosphatase (Diadenosine
5',5'''- P1,P3-triphosphate hydrolase,
Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE,
Fragile histidine triad protein) [Homo sapiens]
Swiss-Prot:P49789
Length = 160
Score = 44.8 bits (101), Expect = 2e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 80 PAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSK-AGDEDEQLLGHLLIVARKVAT 256
P + Y A ++ P P H+LV PR+ + + + DE L V K+ T
Sbjct: 17 PREVFYATPLSYAMVNLRPLLPAHVLVCPRRLVPRFTDLTADETSDLWLTAQKVGSKLET 76
Query: 257 QEGLDKSGFRLVINDGKNGAQSVYHLHVHVL 349
+ S L I DG Q+V H+H+H+L
Sbjct: 77 FH--NASSLTLAIQDGPQAGQTVPHVHIHIL 105
>At5g58240.1 68418.m07292 bis(5'-adenosyl)-triphosphatase, putative
similar to bis(5'-adenosyl)-triphosphatase (Diadenosine
5',5'''- P1,P3-triphosphate hydrolase,
Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE,
Fragile histidine triad protein) [Homo sapiens]
Swiss-Prot:P49789
Length = 180
Score = 44.8 bits (101), Expect = 2e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 80 PAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSK-AGDEDEQLLGHLLIVARKVAT 256
P + Y A ++ P P H+LV PR+ + + + DE L V K+ T
Sbjct: 37 PREVFYATPLSYAMVNLRPLLPAHVLVCPRRLVPRFTDLTADETSDLWLTAQKVGSKLET 96
Query: 257 QEGLDKSGFRLVINDGKNGAQSVYHLHVHVL 349
+ S L I DG Q+V H+H+H+L
Sbjct: 97 FH--NASSLTLAIQDGPQAGQTVPHVHIHIL 125
>At5g01310.1 68418.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain, weak hit to PF01661: Appr-1-p
processing enzyme family
Length = 912
Score = 31.9 bits (69), Expect = 0.15
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 104 DQCVAFHDVNPQAPTHILVIPR-KPISQLSKAGDEDEQLLGHLLIVARKVATQEGLDKSG 280
D V +D P+A H+LV+ R + + L E+ QLL + V K +
Sbjct: 739 DNIVVINDQYPKARKHVLVLARQESLDGLEDVRKENLQLLQEMHNVGLKWV--DRFQNED 796
Query: 281 FRLVINDGKNGAQSVYHLHVHVL 349
L+ G + S+ LH+HV+
Sbjct: 797 ASLIFRLGYHSVPSMRQLHLHVI 819
>At5g64940.2 68418.m08169 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 761
Score = 30.3 bits (65), Expect = 0.44
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 23 KSAAPGGDTIFGKILRKEIPAKFVYEDDQCVA--FHDVNPQAPTHILVIPRKPISQLSKA 196
K + GG T K+LR+++ AK++ E+ + F + Q T + ++P++ + QLS+
Sbjct: 199 KFSYKGGMTEEKKVLRRKVLAKWLKENILRLGPTFIKIGQQFSTRVDILPQEYVDQLSEL 258
Query: 197 GDE 205
D+
Sbjct: 259 QDQ 261
>At5g64940.1 68418.m08168 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 761
Score = 30.3 bits (65), Expect = 0.44
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 23 KSAAPGGDTIFGKILRKEIPAKFVYEDDQCVA--FHDVNPQAPTHILVIPRKPISQLSKA 196
K + GG T K+LR+++ AK++ E+ + F + Q T + ++P++ + QLS+
Sbjct: 199 KFSYKGGMTEEKKVLRRKVLAKWLKENILRLGPTFIKIGQQFSTRVDILPQEYVDQLSEL 258
Query: 197 GDE 205
D+
Sbjct: 259 QDQ 261
>At4g08320.1 68417.m01373 tetratricopeptide repeat (TPR)-containing
protein glutamine-rich tetratricopeptide repeat (TPR)
containing protein (SGT) - Rattus
norvegicus,PID:e1285298 (SP|O70593); contains Pfam
profile PF00515 TPR Domain
Length = 426
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 290 LNGNQTCPAPPGLPPYERQSTDDPATAHLHLQL 192
L+ N+T P PP PP +T DP+++ H+ +
Sbjct: 74 LDNNETIPPPP--PPPVAATTQDPSSSGSHVSV 104
>At2g17600.1 68415.m02036 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 580
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 314 AQSVYHLHVHVLGGRQLEWPP 376
A S H+HV GR+LEW P
Sbjct: 241 AHSKCATHMHVWDGRELEWEP 261
>At5g56570.1 68418.m07059 hypothetical protein similar to unknown
protein (pir |T06019)
Length = 439
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 127 CEPTSTNPYPCDTQEAN 177
C PTS NPYP T+ +N
Sbjct: 300 CSPTSENPYPNGTKFSN 316
>At1g13730.1 68414.m01612 nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF02136: Nuclear transport factor
2 (NTF2) domain, PF00076: RNA recognition motif (a.k.a.
RRM, RBD, or RNP domain)
Length = 428
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 173 PISQLSKAGDEDEQLLGHLLIVARKV--ATQEGLDKS--GFRLVINDG 304
P+S+ S A D+Q G+ + VA + AT E L+++ GF + DG
Sbjct: 260 PVSEHSSAATIDQQAEGYTIFVANLLMDATPEQLNETFKGFGAITKDG 307
>At2g15860.1 68415.m01818 expressed protein and genefinder
Length = 512
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 140 APTHILVIPRKPISQLSKAGDEDEQLL 220
A TH+L++ + IS +K DED + L
Sbjct: 379 AVTHLLILGKSMISHANKVQDEDTEAL 405
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 356 VHPGRERASDIRSVPHSCHHLLLNGNQTCPAPPGLPP 246
+H ++ +DI S H+ GN A P LPP
Sbjct: 2039 LHSSSQKTTDIGSSSHNAVESSSQGNPQTSATPPLPP 2075
>At1g42400.1 68414.m04890 hypothetical protein includes At2g10370,
At5g36050, At1g35090, At1g44860, At4g19300, At1g42400,
At3g43040, At3g42500
Length = 218
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 148 GWCLWVHIMKSYTLIIFIDEF-CRYFFA*YFPKYSIATGSSRFCEFY 11
GW ++V +++ Y + + F R A + AT SRFC FY
Sbjct: 16 GWTIYVMVLRIYKKFLNPNAFELRLVLADEWGTQIEATIGSRFCAFY 62
>At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to
embryonic flower 1 [Arabidopsis thaliana] GI:15430697
Length = 1096
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 299 HLLLNGNQTCPAPPGLPPYERQ 234
H L GN + P PPG ER+
Sbjct: 387 HSLFTGNDSVPCPPGTQRTERK 408
>At3g14350.3 68416.m01816 leucine-rich repeat transmembrane protein
kinase, putative similar to leucine-rich repeat
transmembrane protein kinase 1 GB:AAC27894 from [Zea
mays]
Length = 689
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 293 LLNGNQTCPAPPGLPPYERQS 231
LLN P PPG PP + S
Sbjct: 241 LLNSGPAPPPPPGTPPISKSS 261
>At3g14350.2 68416.m01814 leucine-rich repeat transmembrane protein
kinase, putative similar to leucine-rich repeat
transmembrane protein kinase 1 GB:AAC27894 from [Zea
mays]
Length = 680
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 293 LLNGNQTCPAPPGLPPYERQS 231
LLN P PPG PP + S
Sbjct: 204 LLNSGPAPPPPPGTPPISKSS 224
>At3g14350.1 68416.m01815 leucine-rich repeat transmembrane protein
kinase, putative similar to leucine-rich repeat
transmembrane protein kinase 1 GB:AAC27894 from [Zea
mays]
Length = 717
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -2
Query: 293 LLNGNQTCPAPPGLPPYERQS 231
LLN P PPG PP + S
Sbjct: 241 LLNSGPAPPPPPGTPPISKSS 261
>At2g26110.1 68415.m03133 expressed protein
Length = 309
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -2
Query: 305 CHHLLLNGNQTCPAPPGLPPYERQSTDDPATAHLHLQL*KAVKLASW 165
C +LL NQT P+P P Q T + L + + SW
Sbjct: 2 CFYLLSEKNQTHPSPSSSPFLSEQRTQPKQKSMLDMSESVLTAMYSW 48
>At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family
protein / PEP carboxylase family protein similar to
SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC
4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile
PF00311: phosphoenolpyruvate carboxylase
Length = 1032
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 92 VYEDDQCVA-FHDVNPQAPTHILVIPRKPISQLSKAG 199
VYE+ + ++ FH+ PQA L I +P + S +G
Sbjct: 826 VYENPEFLSYFHEATPQAELGFLNIGSRPTRRKSSSG 862
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,522,688
Number of Sequences: 28952
Number of extensions: 207146
Number of successful extensions: 555
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 517767328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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