Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O23
(374 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g40200.1 68418.m04878 DegP protease, putative contains simila... 29 1.3
At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly... 29 1.3
At4g22320.1 68417.m03227 expressed protein 28 2.3
At4g01440.1 68417.m00185 nodulin MtN21 family protein similar to... 28 2.3
At5g41610.2 68418.m05055 cation/hydrogen exchanger, putative (CH... 27 3.1
At5g41610.1 68418.m05056 cation/hydrogen exchanger, putative (CH... 27 3.1
At5g27230.1 68418.m03248 expressed protein ; expression support... 27 4.1
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 27 4.1
At5g34900.1 68418.m04114 Ulp1 protease family protein contains P... 27 5.4
At5g07940.1 68418.m00920 expressed protein 27 5.4
At5g24450.1 68418.m02882 transcription factor-related low simila... 26 7.1
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 26 7.1
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 26 7.1
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 26 7.1
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 26 9.4
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 26 9.4
>At5g40200.1 68418.m04878 DegP protease, putative contains
similarity to DegP2 protease GI:13172275 from
[Arabidopsis thaliana]
Length = 592
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 147 NVDDEYYKIGKDYDVEANIDNYTNKKAVEEFLKLYRI 257
N +DEY K DYD +D T K+A + L + I
Sbjct: 542 NCEDEYMKFNLDYDQIVVLDTKTAKEATLDILTTHCI 578
>At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly
identical to GI:9957293; contains Pfam profile: PF01397
terpene synthase family
Length = 591
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 99 ERQKKVLSLFQD--VDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEEFLKLYRIGYLPK 272
E+ +K+L+ Q +DQ+ D+ K+G Y EA IDN ++ +
Sbjct: 82 EKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEIDNILTSSYKKDRTNIQESDLHAT 141
Query: 273 YYEFSIFYQ 299
EF +F Q
Sbjct: 142 ALEFRLFRQ 150
>At4g22320.1 68417.m03227 expressed protein
Length = 238
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 75 KDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEE 236
K V +E QKK ++ ++ D++ DD KI +D VE D K VEE
Sbjct: 115 KYVPIAVLEEQKKEITEIEEDDKIEEDD---KIDEDNKVEQE-DKVDEDKTVEE 164
>At4g01440.1 68417.m00185 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 365
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 24 ALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIG 176
++V S VV Y F V + E +KK+ F + DQ DDE YK G
Sbjct: 306 SVVGSGVVIFGLYIFLLGKVRLMKEECEKKLPCRFNEDDQEEDDDEQYKKG 356
>At5g41610.2 68418.m05055 cation/hydrogen exchanger, putative
(CHX18) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 742
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 281 LIVLGKITDSVQFQEFFNSFLIGVVI 204
++V G ITD++ F +F++GV+I
Sbjct: 204 VLVCGFITDAIGIHSMFGAFVVGVLI 229
>At5g41610.1 68418.m05056 cation/hydrogen exchanger, putative
(CHX18) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 810
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 281 LIVLGKITDSVQFQEFFNSFLIGVVI 204
++V G ITD++ F +F++GV+I
Sbjct: 272 VLVCGFITDAIGIHSMFGAFVVGVLI 297
>At5g27230.1 68418.m03248 expressed protein ; expression supported
by MPSS
Length = 948
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 81 VDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEEFLK 245
V A+ +E+++K L L + + E+ K KD+D+E + K+ VE+ K
Sbjct: 69 VKALELEKKEKELCLIDESMKAK-QSEFEKKEKDFDLEQKAEVEKRKREVEQLEK 122
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -1
Query: 359 SKVFSIVEQVEKSNSLFP*LLVEDGELIVLGKITDSVQFQEFFNSFLIGVVID 201
S + +I Q+ S F L E GE+ V GK+ D V SF + V ++
Sbjct: 476 SPLETITVQLSNVESKFASSLSESGEVKVEGKVKDGVPHLTKVGSFEVDVTLE 528
>At5g34900.1 68418.m04114 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At3g47260, At3g29210, At2g02210, At3g32900
Length = 767
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 111 KVLSLFQDVDQVNVDDEYYKIGKDYDVEANI-DNYTNKKAVEEFLKLYRIGYLPKYYEFS 287
K+++L DV ++ V+ IG D ++ + D +TN ++ L+L ++GY K E++
Sbjct: 287 KIVNLVNDVYEIEVNTI---IGNPEDFKSLVPDFHTNDTEFQQVLELVKMGYRLKKTEWN 343
>At5g07940.1 68418.m00920 expressed protein
Length = 1526
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 56 NVSLQDKRCRRSVCGAPEKGFIPFP 130
N+S QDK C+ G EK F+ P
Sbjct: 393 NISAQDKFCQMEDSGPAEKSFMKVP 417
>At5g24450.1 68418.m02882 transcription factor-related low
similarity to transcription factor IIIC63 [Homo sapiens]
GI:5281316
Length = 545
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 48 SPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNY 212
S + + TKD+ ++K + D D ++DDEY + D D+ + Y
Sbjct: 434 SQRNHQETTKDMKKCKNTNKEKDDDVNADEDSEDLDDEYEEAANDDDISISSHGY 488
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 120 SLFQDVDQVNVDDEYYKIGKDYDVEANIDNYT 215
SL + DDE Y D+++EA DNY+
Sbjct: 94 SLLDPESLIYEDDENYSEQYDFEMEAEPDNYS 125
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 9 LAGLIALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEY 164
+AG +A + S+ +P YH K + + E+ + +S F +NVD +
Sbjct: 490 IAGALAYLHSAASTP-VYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTH 540
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 9 LAGLIALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEY 164
+AG +A + S+ +P YH K + + E+ + +S F +NVD +
Sbjct: 527 IAGALAYLHSAASTP-VYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTH 577
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = -1
Query: 365 KVSKVFSIVEQVEKSNSLFP*LLV---EDGELIVLGKITDSVQFQEFFNS 225
+V +++S++ +E S+S ++ +DG+L++L K DSV F+ S
Sbjct: 581 RVERLYSVLNVLEFSSSKKRMSVIVQDQDGKLLLLCKGADSVMFERLSES 630
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +3
Query: 102 RQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNYTNKKAVEE 236
R++ ++ QD + N DD+ K GKD + + K++ +
Sbjct: 230 RRRNCRNIEQDTSEANDDDDQNKRGKDSSSDEPCERQRKKRSATQ 274
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,548,383
Number of Sequences: 28952
Number of extensions: 138059
Number of successful extensions: 392
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 507810264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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