Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O21
(267 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 27 0.34
SPAC22F8.12c |shf1||small histone ubiquitination factor Shf1|Sch... 27 0.34
SPBC336.05c |||S-adenosylmethionine-dependentmethyltransferase|S... 25 2.4
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 24 4.1
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 23 7.2
SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease ... 23 7.2
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 23 7.2
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 23 9.6
SPAC17C9.10 |stm1||G-protein coupled receptor Stm1|Schizosacchar... 23 9.6
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 23 9.6
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 23 9.6
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 27.5 bits (58), Expect = 0.34
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -3
Query: 250 FLNEHFSAVPSIKIAPVTQCAAV---STYFELMSEPPHSSFI*SKLSYSITTSHGYWVIF 80
FL E + K P++ S E +S+ S + K+ T+HG W
Sbjct: 439 FLKESCGIIEKSKFIPISGLKGTNLTSISQEKLSQWYKSDTLLGKIDKEADTNHGTWNFL 498
Query: 79 VSFPPTILLTTVSSTPQH 26
++ P ++ ++ ++ P++
Sbjct: 499 LNLPLSLTISHITPLPEN 516
>SPAC22F8.12c |shf1||small histone ubiquitination factor
Shf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 165
Score = 27.5 bits (58), Expect = 0.34
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -2
Query: 215 QDCSSDTVCSSEHVLRTDE*ATA*QLHMIKTLIFDHHKPWILGDFCVISTDNFINNGVF 39
Q C S SS+ +L ++ A Q+H + + D ++ + D V S ++F+NN F
Sbjct: 108 QSCKSACENSSQSLLNVEQ-QYAQQVHFWEKIRTDIYREGLRSDAAVKSLNDFVNNVSF 165
>SPBC336.05c |||S-adenosylmethionine-
dependentmethyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 378
Score = 24.6 bits (51), Expect = 2.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 122 LIFDHHKPWILGDFCVISTDNFINNGVFDSTTLVVA 15
L+F + KP + CV+ST NF N +F+ + + +
Sbjct: 130 LVFGNLKP----NVCVVSTPNFEFNTIFEKLSTLTS 161
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 23.8 bits (49), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 142 CYAVAHSSVRSTCSLLHTVSLEQS*LKE 225
CY AH ++ SLL ++L QS L++
Sbjct: 100 CYINAHKLEKNNSSLLRDLALLQSQLRQ 127
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 23.0 bits (47), Expect = 7.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 6 PLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLT 185
PLES NE + NK GG D + V+ E E D + + L S+Y LT
Sbjct: 12 PLESENESSLTSRFLPNKRDGGKDNE------SVIPEKEEPDLNEPVLAVPLPKSRYALT 65
>SPAC22A12.01c |pso2|snm1, SPAC56F8.17c, snm1|DNA 5' exonuclease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 560
Score = 23.0 bits (47), Expect = 7.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 174 YVLTAAHCVTGAILIEGTAEKCSFRKIL 257
YVL A HC A+ + T + R++L
Sbjct: 271 YVLDANHCPGSAMFVFETLQSNQTRRVL 298
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 23.0 bits (47), Expect = 7.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 98 WILGDFCVISTDNFINNGVFD 36
W GDF + + + NGVF+
Sbjct: 270 WYWGDFFFLLRSSLVFNGVFE 290
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 22.6 bits (46), Expect = 9.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 111 IEYESFDHMKLLCGGSLISSKYVL 182
+ Y FD LL SLI SK V+
Sbjct: 223 VSYSEFDEQLLLHARSLIPSKAVV 246
>SPAC17C9.10 |stm1||G-protein coupled receptor
Stm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 22.6 bits (46), Expect = 9.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 101 PWILGDFCVISTDNFI 54
PWILG F I D +I
Sbjct: 245 PWILGAFSTIFLDIYI 260
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 22.6 bits (46), Expect = 9.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 113 DHHKPWILGDFCVISTD 63
D PW+L DF +IS++
Sbjct: 339 DEFIPWMLSDFQLISSE 355
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 22.6 bits (46), Expect = 9.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 224 SFNQDCSSDTVCSSEHVLRT 165
SF Q CS++ +CS+E R+
Sbjct: 473 SFFQKCSAEFLCSNEPNFRS 492
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,217,094
Number of Sequences: 5004
Number of extensions: 22619
Number of successful extensions: 59
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 55545318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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