Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O21
(267 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g23600.1 68415.m02816 hydrolase, alpha/beta fold family prote... 29 0.42
At2g23590.1 68415.m02815 hydrolase, alpha/beta fold family prote... 29 0.56
At1g50750.1 68414.m05707 expressed protein 29 0.56
At1g72970.1 68414.m08439 glucose-methanol-choline (GMC) oxidored... 28 0.74
At4g33380.1 68417.m04745 expressed protein 27 1.3
At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein ... 26 3.0
At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein ... 26 3.9
At3g16620.1 68416.m02124 chloroplast outer membrane protein, put... 26 3.9
At3g23310.1 68416.m02940 protein kinase, putative contains prote... 25 5.2
At1g32860.1 68414.m04049 glycosyl hydrolase family 17 protein si... 25 5.2
At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing ... 25 6.9
At4g36650.1 68417.m05201 transcription factor IIB (TFIIB) family... 25 6.9
At4g17720.1 68417.m02646 RNA recognition motif (RRM)-containing ... 25 6.9
At1g73310.1 68414.m08484 serine carboxypeptidase S10 family prot... 25 6.9
At5g58820.1 68418.m07370 subtilase family protein contains simil... 25 9.1
At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein ... 25 9.1
At4g19050.1 68417.m02806 mob1/phocein family protein contains Pf... 25 9.1
At1g27620.1 68414.m03373 transferase family protein similar to h... 25 9.1
At1g17600.1 68414.m02173 disease resistance protein (TIR-NBS-LRR... 25 9.1
>At2g23600.1 68415.m02816 hydrolase, alpha/beta fold family protein
similar to ethylene-induced esterase [Citrus sinensis]
GI:14279437, polyneuridine aldehyde esterase [Rauvolfia
serpentina] GI:6651393; contains Pfam profile PF00561:
hydrolase, alpha/beta fold family
Length = 263
Score = 29.1 bits (62), Expect = 0.42
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 84 ITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTA 188
I YP +VIE E DHM + C L+S + A
Sbjct: 225 IHNYPANLVIEMEETDHMPMFCKPQLLSDHLLAIA 259
>At2g23590.1 68415.m02815 hydrolase, alpha/beta fold family protein
similar to ethylene-induced esterase [Citrus sinensis]
GI:14279437, polyneuridine aldehyde esterase [Rauvolfia
serpentina] GI:6651393; contains Pfam profile PF00561:
hydrolase, alpha/beta fold family
Length = 272
Score = 28.7 bits (61), Expect = 0.56
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 84 ITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTA 188
I YP +VIE E DH+ L C L+S + A
Sbjct: 234 IDNYPPNLVIEMEGTDHLPLFCKPQLLSDHLLAIA 268
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 28.7 bits (61), Expect = 0.56
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = -3
Query: 256 KIFLNEHFSAVPSIKIAPVTQCAAVSTYFELMSEPPHSSFI*SKLSYSITTSHGYWVIFV 77
K L++ + + K+ VTQ A + + + E H +F+ L+Y + S Y +
Sbjct: 130 KAKLDKEWKKIKKAKVNFVTQVAWMERFMDSGDELEHVAFLVLWLNYFVFPSRLYHLYKA 189
Query: 76 SFPPTILLTT 47
FP + L+T
Sbjct: 190 VFPIVVHLST 199
>At1g72970.1 68414.m08439 glucose-methanol-choline (GMC)
oxidoreductase family protein similar to mandelonitrile
lyase from Prunus serotina [SP|P52706, SP|P52707];
contains Pfam profile PF00732 GMC oxidoreductase
Length = 594
Score = 28.3 bits (60), Expect = 0.74
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 244 NEHFSAVPSIKIAPVTQCAAVSTYFELMSEPPHSSFI*SKLSYSITTSH 98
NE FS +P+ + P A ++ + E + SFI KL+Y I+ H
Sbjct: 388 NELFSTIPAKQRRPEATQAYITRNKYQLHEAFNGSFILEKLAYPISRGH 436
>At4g33380.1 68417.m04745 expressed protein
Length = 328
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +2
Query: 140 AAMRW-LTHQFEVRAHCCTLC 199
AA+RW LTH E A CC C
Sbjct: 229 AAVRWGLTHHKESAADCCQAC 249
>At3g56930.1 68416.m06332 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 477
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -2
Query: 116 FDHHKPWILGDFCVISTDNFINNGVFDSTTL---VVAF*W 6
FDHH PW+ G + F + STTL V AF W
Sbjct: 172 FDHHCPWV-GQCIGVRNYRFFFMFISTSTTLCIYVFAFSW 210
>At3g26935.1 68416.m03371 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 443
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -2
Query: 116 FDHHKPWILGDFCVISTDNFINNGVFDSTTL---VVAF*W 6
FDHH PW+ G + F VF +T L V AF W
Sbjct: 175 FDHHCPWV-GQCIGMRNYRFFFMFVFSTTLLCIYVFAFCW 213
>At3g16620.1 68416.m02124 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1089
Score = 25.8 bits (54), Expect = 3.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 3 FPLESNNECCGVEDTVVNK 59
FPL SN+E C +E+T N+
Sbjct: 65 FPLASNDEVCDLEETSRNE 83
>At3g23310.1 68416.m02940 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 568
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 30 CGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMK 140
C VE + K G N+ K ++PW +E+E MK
Sbjct: 401 CNVEQRIGTK--GANEIK--EHPWFSGVEWEKLYQMK 433
>At1g32860.1 68414.m04049 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase precursor GI:4097948 from
[Oryza sativa]
Length = 426
Score = 25.4 bits (53), Expect = 5.2
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -3
Query: 148 HSSFI*SKLS--YSITTSHGYWVIFVSFPPT 62
HS+ I + LS S+TT+H ++ SFPP+
Sbjct: 142 HSALITAGLSDQISVTTAHSLSILKSSFPPS 172
>At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing
protein similar to unknown protein (pir||C71447)
Length = 295
Score = 25.0 bits (52), Expect = 6.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 150 GGSLISSKYVLTAAHCVTGA 209
G +++ ++YVLT A VTGA
Sbjct: 203 GSAIMKNRYVLTGATWVTGA 222
>At4g36650.1 68417.m05201 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 503
Score = 25.0 bits (52), Expect = 6.9
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -3
Query: 262 WNKIFLNEHFSAVPSIKIAPVTQCAAVSTYFELMSEPPHSSFI 134
W+ + + + AVP K P T + + +PP SF+
Sbjct: 314 WDDLLPSNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSFV 356
>At4g17720.1 68417.m02646 RNA recognition motif (RRM)-containing
protein
Length = 313
Score = 25.0 bits (52), Expect = 6.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 150 GGSLISSKYVLTAAHCVTGA 209
G +++ ++YVLT A VTGA
Sbjct: 199 GSAIMKNRYVLTGATWVTGA 218
>At1g73310.1 68414.m08484 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P07519) [Hordeum vulgare]; glucose acyltransferase
GB:AAD01263 [Solanum berthaultii]; contains Pfam
profile: PF00450 Serine carboxypeptidase
Length = 441
Score = 25.0 bits (52), Expect = 6.9
Identities = 12/56 (21%), Positives = 25/56 (44%)
Frame = -2
Query: 194 VCSSEHVLRTDE*ATA*QLHMIKTLIFDHHKPWILGDFCVISTDNFINNGVFDSTT 27
+ S +H ++ T + + I D +PW++ D T +++N F + T
Sbjct: 360 IYSGDHDIQVPFLGTQAWIRSLNYSIIDDWRPWMIKDQIAGYTTSYVNKMTFATVT 415
>At5g58820.1 68418.m07370 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]
Length = 703
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 105 VVIEYESFDHMKLLCGGSLISSKYVLTAAHCVT 203
+V E + DH+ LCG + S L A VT
Sbjct: 560 LVYELDKADHIAFLCGLNYTSKTLHLIAGEAVT 592
>At5g41060.1 68418.m04991 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 410
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 116 FDHHKPWILGDFCVISTDNFINNGVFDSTTLVV 18
FDHH PW+ G F VF +T L V
Sbjct: 173 FDHHCPWV-GQCIAQRNYRFFFMFVFSTTLLCV 204
>At4g19050.1 68417.m02806 mob1/phocein family protein contains Pfam
PF03637: Mob1/phocein family; contains Pfam F00560:
Leucine Rich Repeats; contains TIGRFAMS profile
TIGR01612: reticulocyte binding protein; hypothetical
protein YIL106w, Saccharomyces cerevisiae, PIR2:S48466
Length = 1405
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 120 ESFDHMKLLCGGSLISSK-YVLTAAHCV 200
ESF+ M LC L SSK VL + C+
Sbjct: 883 ESFESMSYLCESILCSSKRIVLADSSCI 910
>At1g27620.1 68414.m03373 transferase family protein similar to
hypersensitivity-related gene product HSR201 -
Nicotiana tabacum, EMBL:X95343; contains Pfam
transferase family domain PF00248
Length = 442
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 67 PTILLTTVSSTPQHSLLLSS 8
PT L+T +S TP HSL LS+
Sbjct: 14 PT-LITPLSPTPNHSLYLSN 32
>At1g17600.1 68414.m02173 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1025
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 156 SLISSKYVLTAAHCVTGAILIEGTAEKCSFRKILFHQ 266
+LI++ + ++HCV AI++ A S R L H+
Sbjct: 142 NLIANLSGVVSSHCVDEAIMVGEIARDISRRVTLMHK 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,413,389
Number of Sequences: 28952
Number of extensions: 118331
Number of successful extensions: 317
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 12,070,560
effective HSP length: 67
effective length of database: 10,130,776
effective search space used: 212746296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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