Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O20
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 350 4e-97
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 348 2e-96
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 348 2e-96
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 348 2e-96
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 347 5e-96
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 346 9e-96
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 346 9e-96
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 345 2e-95
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 344 4e-95
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 155 2e-38
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 155 2e-38
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 155 2e-38
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 150 7e-37
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 150 7e-37
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 150 7e-37
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 100 1e-21
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 87 7e-18
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 87 7e-18
At2g24340.1 68415.m02909 hypothetical protein 32 0.39
At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-conta... 29 2.1
At1g14850.1 68414.m01776 non-repetitive/WGA-negative nucleoporin... 28 4.8
At2g17080.1 68415.m01972 hypothetical protein contains Pfam prof... 28 6.3
At1g18620.1 68414.m02321 expressed protein 28 6.3
At5g07030.1 68418.m00796 aspartyl protease family protein contai... 27 8.3
At1g72270.1 68414.m08355 expressed protein 27 8.3
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 350 bits (861), Expect = 4e-97
Identities = 156/183 (85%), Positives = 175/183 (95%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DP
Sbjct: 246 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADP 305
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + +FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+
Sbjct: 306 RHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 365
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
Query: 542 QEA 550
Q+A
Sbjct: 426 QDA 428
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 348 bits (856), Expect = 2e-96
Identities = 154/183 (84%), Positives = 175/183 (95%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR+LTVPELTQQM+D+KNMM A DP
Sbjct: 246 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADP 305
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + +FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+
Sbjct: 306 RHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 365
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
Query: 542 QEA 550
Q+A
Sbjct: 426 QDA 428
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 348 bits (856), Expect = 2e-96
Identities = 154/183 (84%), Positives = 175/183 (95%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR+LTVPELTQQM+D+KNMM A DP
Sbjct: 246 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADP 305
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + +FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+
Sbjct: 306 RHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 365
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
Query: 542 QEA 550
Q+A
Sbjct: 426 QDA 428
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 348 bits (856), Expect = 2e-96
Identities = 155/183 (84%), Positives = 174/183 (95%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR LTVPELTQQM+DAKNMM A DP
Sbjct: 246 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADP 305
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + +FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+
Sbjct: 306 RHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 365
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
Query: 542 QEA 550
Q+A
Sbjct: 426 QDA 428
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 347 bits (852), Expect = 5e-96
Identities = 154/183 (84%), Positives = 175/183 (95%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DP
Sbjct: 246 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADP 305
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + +FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDI PRGL MA+
Sbjct: 306 RHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMAS 365
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
Query: 542 QEA 550
Q+A
Sbjct: 426 QDA 428
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 346 bits (850), Expect = 9e-96
Identities = 153/185 (82%), Positives = 175/185 (94%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQY AL+VPELTQQM+DAKNMM A DP
Sbjct: 246 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADP 305
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + +FRG+MS KEVDEQMMN+QNKNSSYFVEWIPNNVK++VCDI P GLKMA+
Sbjct: 306 RHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMAS 365
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL++EYQQY
Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
Query: 542 QEAAI 556
Q+A +
Sbjct: 426 QDATV 430
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 346 bits (850), Expect = 9e-96
Identities = 153/183 (83%), Positives = 176/183 (96%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQY +LTVPELTQQM+D+KNMM A DP
Sbjct: 247 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADP 306
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + IFRG+MS KEVDEQ++NIQNKNSSYFVEWIPNNVK++VCDIPP+GLKMAA
Sbjct: 307 RHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAA 366
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL++EYQQY
Sbjct: 367 TFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 426
Query: 542 QEA 550
Q+A
Sbjct: 427 QDA 429
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 345 bits (848), Expect = 2e-95
Identities = 153/183 (83%), Positives = 175/183 (95%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQY AL+VPELTQQM+DAKNMM A DP
Sbjct: 246 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADP 305
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + +FRG++S KEVDEQMMNIQNKNSSYFVEWIPNNVK++VCDI P+GLKMA+
Sbjct: 306 RHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMAS 365
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL++EYQQY
Sbjct: 366 TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQY 425
Query: 542 QEA 550
Q+A
Sbjct: 426 QDA 428
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 344 bits (845), Expect = 4e-95
Identities = 151/183 (82%), Positives = 175/183 (95%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQY +LTVPELTQQM+DAKNMM A DP
Sbjct: 247 LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADP 306
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAA 361
RHGRYLT + +FRG+MS KEVDEQ++N+QNKNSSYFVEWIPNNVK++VCDIPP G+KMA+
Sbjct: 307 RHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMAS 366
Query: 362 TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMNDLISEYQQY 541
TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTG+GMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 367 TFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 426
Query: 542 QEA 550
Q+A
Sbjct: 427 QDA 429
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 155 bits (376), Expect = 2e-38
Identities = 67/187 (35%), Positives = 113/187 (60%), Gaps = 8/187 (4%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
+N D+ + N+VP+PR+HF ++ +AP+ S + L+VPE+T +F+ +MMA CDP
Sbjct: 248 INVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP 307
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP------- 340
RHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGD 367
Query: 341 -RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMND 517
++ A I N+TA+ E+F RI +F M+ ++AF+HWY G+GM+E EF+EA ++
Sbjct: 368 LAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 518 LISEYQQ 538
L +Y++
Sbjct: 428 LEKDYEE 434
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 155 bits (376), Expect = 2e-38
Identities = 67/187 (35%), Positives = 113/187 (60%), Gaps = 8/187 (4%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
+N D+ + N+VP+PR+HF ++ +AP+ S + L+VPE+T +F+ +MMA CDP
Sbjct: 248 INVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP 307
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP------- 340
RHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGD 367
Query: 341 -RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMND 517
++ A I N+TA+ E+F RI +F M+ ++AF+HWY G+GM+E EF+EA ++
Sbjct: 368 LAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 518 LISEYQQ 538
L +Y++
Sbjct: 428 LEKDYEE 434
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 155 bits (376), Expect = 2e-38
Identities = 67/187 (35%), Positives = 112/187 (59%), Gaps = 8/187 (4%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
+N D+ + N+VP+PR+HF ++ +AP+ S + +VPE+T +F+ NMMA CDP
Sbjct: 248 INVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDP 307
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP------- 340
RHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGD 367
Query: 341 -RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMND 517
++ A I N+TA+ E+F RI +F M+ ++AF+HWY G+GM+E EF+EA ++
Sbjct: 368 LAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 518 LISEYQQ 538
L +Y++
Sbjct: 428 LEKDYEE 434
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 150 bits (364), Expect = 7e-37
Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN D+ + N+VP+PR+HF ++ +AP+ S + L+V E+T F+ +MMA CDP
Sbjct: 248 LNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP------- 340
RHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD 367
Query: 341 -RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMND 517
++ A I NST++ E+F RI +F M+ ++AF+HWY G+GM+E EF+EA ++
Sbjct: 368 LAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 518 LISEYQQ 538
L +Y++
Sbjct: 428 LEKDYEE 434
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (364), Expect = 7e-37
Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN D+ + N+VP+PR+HF ++ +AP+ S + L+V E+T F+ +MMA CDP
Sbjct: 248 LNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP------- 340
RHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD 367
Query: 341 -RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMND 517
++ A I NST++ E+F RI +F M+ ++AF+HWY G+GM+E EF+EA ++
Sbjct: 368 LAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 518 LISEYQQ 538
L +Y++
Sbjct: 428 LEKDYEE 434
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (364), Expect = 7e-37
Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN D+ + N+VP+PR+HF ++ +AP+ S + L+V E+T F+ +MMA CDP
Sbjct: 248 LNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP------- 340
RHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD 367
Query: 341 -RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGMDEMEFTEAESNMND 517
++ A I NST++ E+F RI +F M+ ++AF+HWY G+GM+E EF+EA ++
Sbjct: 368 LAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 518 LISEYQQ 538
L +Y++
Sbjct: 428 LEKDYEE 434
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 100 bits (239), Expect = 1e-21
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDP 181
LN D+ + N+VP+PR+HF ++ +AP+ S + L+V E+T F+ +MMA CDP
Sbjct: 248 LNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP 307
Query: 182 RHGRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP------- 340
RHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 308 RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD 367
Query: 341 -RGLKMAATFIGNSTAIQE 394
++ A I NST++ E
Sbjct: 368 LAKVQRAVCMISNSTSVAE 386
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 87.4 bits (207), Expect = 7e-18
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMAACD 178
+N DL L +++P PR HF +TG+ PLT R + R TV ++ +++ KN+M +
Sbjct: 249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSY 308
Query: 179 PRH-----GRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP- 340
R+ +Y+++ I +G + +V E + I+ + F++W P +++ A+ P
Sbjct: 309 ARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPY 368
Query: 341 --RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGM----DEMEFTEAE 502
+++ + + T+I+ LF R Q+ + +++AFL Y M D EF E+
Sbjct: 369 VQTSHRVSGLMLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESR 428
Query: 503 SNMNDLISEYQ 535
+ L+ EY+
Sbjct: 429 DIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 87.4 bits (207), Expect = 7e-18
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Frame = +2
Query: 2 LNADLRKLAVNMVPFPRLHFFITGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMAACD 178
+N DL L +++P PR HF +TG+ PLT R + R TV ++ +++ KN+M +
Sbjct: 249 MNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSY 308
Query: 179 PRH-----GRYLTVATIFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP- 340
R+ +Y+++ I +G + +V E + I+ + F+EW P +++ A+ P
Sbjct: 309 ARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPY 368
Query: 341 --RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGKGM----DEMEFTEAE 502
+++ + + T+I+ LF + Q+ + +++AFL Y M D EF E+
Sbjct: 369 VQTAHRVSGLMLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESR 428
Query: 503 SNMNDLISEYQ 535
+ L+ EY+
Sbjct: 429 DIIESLVDEYK 439
>At2g24340.1 68415.m02909 hypothetical protein
Length = 322
Score = 31.9 bits (69), Expect = 0.39
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 230 SMKEVDEQMMNIQNKNSSYFVEWIPNNVKT-----AVCDIPPRGLKMAATFIGNSTAIQE 394
+MK + MN+ NKN+ E + N + T + GLK+ AT G T + E
Sbjct: 143 AMKGFYYEFMNLDNKNAFNNDENLNNLMITFTNLGGASNANESGLKIGATTSGVKTKVDE 202
Query: 395 LFKRISEQFTAMFRRKAFLHWYT 463
+ + + +F+HW T
Sbjct: 203 DIEPLCRHYKCATMDSSFIHWIT 225
>At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-containing
protein contains Pfam profile PF00226: DnaJ domain
Length = 2554
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = -3
Query: 556 DGRFLILLVFRYKIVHVALRLRE--LHFVHALAGVPVQECLASEHSGELFRDALEQLL 389
DG L+LL+ +++H A RE LH ++ALA P A++H G ++ LE LL
Sbjct: 2074 DGSSLLLLL---QMLHSAPSFREGALHVLYALASTPELAWAAAKHGGVVY--ILELLL 2126
>At1g14850.1 68414.m01776 non-repetitive/WGA-negative nucleoporin
family protein contains Pfam profile: PF03177
non-repetitive/WGA-negative nucleoporin
Length = 1464
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 508 VALRLRELHFVHALAGVPVQECLASEHSGELFRDALE 398
V R +L F A+ +P+Q+ A + +G+ F D L+
Sbjct: 929 VCKRFEDLRFYEAVVCLPLQKAQALDPAGDAFNDQLD 965
>At2g17080.1 68415.m01972 hypothetical protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 263
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = -3
Query: 496 LRELH-FVHALAGVPV-QECLASEHSGELFRDALEQLLDGS-RVAD 368
L+ELH + L PV Q+ L+ EH+ + A+EQLLDGS R+ D
Sbjct: 51 LQELHESLDKLISRPVTQQALSQEHN----KKAVEQLLDGSLRILD 92
>At1g18620.1 68414.m02321 expressed protein
Length = 978
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 301 PEQREDRRVRHPAPRTEDGGDLHRQLDCHPGAVQAHLGTVH 423
P ED HP+P + +++R+++ P +QA G+V+
Sbjct: 666 PTFSEDGSSEHPSPVSVLNAEIYREIEPSPVKIQASEGSVN 706
>At5g07030.1 68418.m00796 aspartyl protease family protein contains
Pfam profile:PF00026 eukaryotic aspartyl protease
Length = 439
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +2
Query: 251 QMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM-----AATFIGNSTAIQELFKRISE 415
Q++ ++S Y+V + V V D+PP + A T + T L K + E
Sbjct: 273 QLLRNPRRSSLYYVNLVAIRVGRKVVDLPPAAIAFNPSTGAGTIFDSGTVYTRLAKPVYE 332
Query: 416 QFTAMFRRK 442
FR++
Sbjct: 333 AVRNEFRKR 341
>At1g72270.1 68414.m08355 expressed protein
Length = 2777
Score = 27.5 bits (58), Expect = 8.3
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Frame = +2
Query: 248 EQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTA 427
EQ++ I + V + +V VC P GL A GN + L K + T
Sbjct: 680 EQLVIISEREDGGIVNELAYDVLVKVCTDPSNGLMPDAYRKGNIKRLLALMKSLKATETG 739
Query: 428 MFRRKAFLHWYTGK-GMDEMEFTEAESNMNDLISEY 532
+ R L G+ + F E N+ D S Y
Sbjct: 740 -YPRDLLLAIIRGRPSLASAFFDEFPYNVEDFTSPY 774
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,875,761
Number of Sequences: 28952
Number of extensions: 210632
Number of successful extensions: 747
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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