Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O19
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    27   0.54 
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    25   1.2  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.2  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   2.9  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   2.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.8  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 0.54
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 129 ALASRTDAATPRTSTSDSPAPTRAS 203
           A A+   A+TP T  S SP+PTR++
Sbjct: 158 AAAAGASASTPPTIPSASPSPTRST 182


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 128 GAGVENGRGHPAHLNQRQPRADPRLTHHNQ 217
           G+G  + +  P H + +Q +   R+ HH+Q
Sbjct: 15  GSGASSSQRSPFHHHHQQQQNHQRMPHHHQ 44


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 120 SPPALASRTDAATPRTSTSDSPAPTRA 200
           SPPA+A+    +  RT+T  +   TRA
Sbjct: 561 SPPAVATPPSTSRARTATRTATTTTRA 587


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 123 PPALASRTDAATPRTSTSDSPAPT 194
           PP   + T   T  T+T+ +PAPT
Sbjct: 179 PPPTTTTTTVWTDPTATTTTPAPT 202


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 123 PPALASRTDAATPRTSTSDSPAPT 194
           PP   + T   T  T+T+ +PAPT
Sbjct: 179 PPPTTTTTTVWTDPTATTTTPAPT 202


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 173 QRQPRADPRLTHHNQSGXXXXXXXXQTDDESSVLDSQDVSSADR 304
           QR PR DP +   +           Q  + S +L  +DV+ A++
Sbjct: 226 QRSPRRDPPINRQHTPCAGRRWKTKQFRENSFLLALKDVNFAEQ 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,666
Number of Sequences: 2352
Number of extensions: 1550
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)