SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O19
         (550 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022171-1|AAY51565.1|  890|Drosophila melanogaster IP01285p pro...    29   3.1  
BT003565-1|AAO39569.1|  816|Drosophila melanogaster LP02021p pro...    29   3.1  
AE013599-2111|AAM70963.2| 1082|Drosophila melanogaster CG30084-P...    29   3.1  
AE013599-2110|AAF58107.4| 1196|Drosophila melanogaster CG30084-P...    29   3.1  
AE013599-2109|AAZ52806.1| 1382|Drosophila melanogaster CG30084-P...    29   3.1  
AE013599-2108|ABI31098.1|  890|Drosophila melanogaster CG30084-P...    29   3.1  
AY061571-1|AAL29119.1|  539|Drosophila melanogaster SD01935p pro...    28   7.2  

>BT022171-1|AAY51565.1|  890|Drosophila melanogaster IP01285p
           protein.
          Length = 890

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 117 VSPPALASRTDAATPRTST-SDSPAPTRAS 203
           V+P A  + T AATP+ +T +DSPA T +S
Sbjct: 462 VAPSAATAATAAATPQAATATDSPAATASS 491


>BT003565-1|AAO39569.1|  816|Drosophila melanogaster LP02021p
           protein.
          Length = 816

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 117 VSPPALASRTDAATPRTST-SDSPAPTRAS 203
           V+P A  + T AATP+ +T +DSPA T +S
Sbjct: 199 VAPSAATAATAAATPQAATATDSPAATASS 228


>AE013599-2111|AAM70963.2| 1082|Drosophila melanogaster CG30084-PC,
           isoform C protein.
          Length = 1082

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 117 VSPPALASRTDAATPRTST-SDSPAPTRAS 203
           V+P A  + T AATP+ +T +DSPA T +S
Sbjct: 654 VAPSAATAATAAATPQAATATDSPAATASS 683


>AE013599-2110|AAF58107.4| 1196|Drosophila melanogaster CG30084-PA,
           isoform A protein.
          Length = 1196

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 117 VSPPALASRTDAATPRTST-SDSPAPTRAS 203
           V+P A  + T AATP+ +T +DSPA T +S
Sbjct: 579 VAPSAATAATAAATPQAATATDSPAATASS 608


>AE013599-2109|AAZ52806.1| 1382|Drosophila melanogaster CG30084-PF,
           isoform F protein.
          Length = 1382

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 117 VSPPALASRTDAATPRTST-SDSPAPTRAS 203
           V+P A  + T AATP+ +T +DSPA T +S
Sbjct: 404 VAPSAATAATAAATPQAATATDSPAATASS 433


>AE013599-2108|ABI31098.1|  890|Drosophila melanogaster CG30084-PG,
           isoform G protein.
          Length = 890

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 117 VSPPALASRTDAATPRTST-SDSPAPTRAS 203
           V+P A  + T AATP+ +T +DSPA T +S
Sbjct: 462 VAPSAATAATAAATPQAATATDSPAATASS 491


>AY061571-1|AAL29119.1|  539|Drosophila melanogaster SD01935p
           protein.
          Length = 539

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 126 PALASRTDAATPRTSTSDSPAPTRASH 206
           P+L SR    T  TSTS  P P R +H
Sbjct: 513 PSLYSRGGGVTTSTSTSPPPKPPRQNH 539


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,892,517
Number of Sequences: 53049
Number of extensions: 105621
Number of successful extensions: 727
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -