Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O19
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/56 (23%), Positives = 17/56 (30%)
 Frame = +3

Query: 135 ASRTDAATPRTSTSDSPAPTRASHXXXXXXXXXXXXXXXXXXXXPCSTARTSPAPT 302
           A  TDA+TP T T+     T  +                        T  T+  PT
Sbjct: 208 AGSTDASTPATVTTTGATTTLPAASATGTGPATPSAVVATSNATAAMTTGTTTIPT 263


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 126 PALASRTDAATPRTSTSDSPAPTRAS 203
           PA + R  +A   +STS SP P  ++
Sbjct: 823 PASSPRYLSAAATSSTSTSPRPASST 848



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 150 AATPRTSTSDSPAPTRAS 203
           AAT  TSTS  PA + A+
Sbjct: 833 AATSSTSTSPRPASSTAA 850


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,794
Number of Sequences: 438
Number of extensions: 661
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)