Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O18
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49887-3|CAC70079.1|  639|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z49887-2|CAA90057.1|  625|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF068867-1|AAC35506.1|  639|Caenorhabditis elegans putative acti...    29   2.7  
AF039047-9|AAB94228.1|  303|Caenorhabditis elegans Hypothetical ...    28   4.6  
U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z49887-3|CAC70079.1|  639|Caenorhabditis elegans Hypothetical
           protein F09B9.2b protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 75  IETFEEKVRIPFHWISANGAHRPTG-MVPH 161
           IE   +K R+P HW   N +  P+G  +PH
Sbjct: 437 IEDSHKKQRLPLHWDPRNASRTPSGKKMPH 466


>Z49887-2|CAA90057.1|  625|Caenorhabditis elegans Hypothetical
           protein F09B9.2a protein.
          Length = 625

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 75  IETFEEKVRIPFHWISANGAHRPTG-MVPH 161
           IE   +K R+P HW   N +  P+G  +PH
Sbjct: 423 IEDSHKKQRLPLHWDPRNASRTPSGKKMPH 452


>AF068867-1|AAC35506.1|  639|Caenorhabditis elegans putative
           actin-binding proteinUNC-115 protein.
          Length = 639

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 75  IETFEEKVRIPFHWISANGAHRPTG-MVPH 161
           IE   +K R+P HW   N +  P+G  +PH
Sbjct: 437 IEDSHKKQRLPLHWDPRNASRTPSGKKMPH 466


>AF039047-9|AAB94228.1|  303|Caenorhabditis elegans Hypothetical
           protein K11D12.8 protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -2

Query: 512 SAYFFSTANHRTNVSALVSTERTLFTS*PVIVISSLLNPNVSSTACAKAVSM 357
           S YFFS  N + N S  V     LF   PV+    LL   + S    + VS+
Sbjct: 219 SIYFFSQTNFKANYSFFVVFFYLLFFIFPVLKKPKLLQDRIISILLLQGVSI 270


>U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical
           protein C24A8.1 protein.
          Length = 582

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 394 LGFNRELITITGQDVNSVLSVLTKAETFVRWLAVEKKYALSKMDET 531
           LGF  ++  IT   + SV+ +  K    + W    +K  L K++ET
Sbjct: 194 LGFGADVSNITTSAIQSVIGIAPKNRNMITW----EKPLLKKIEET 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,769,330
Number of Sequences: 27780
Number of extensions: 334268
Number of successful extensions: 914
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)