Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O17
(615 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 256 4e-67
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 177 2e-43
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 149 5e-35
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 145 8e-34
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 132 6e-30
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 105 1e-21
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 101 1e-20
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 91 2e-17
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 91 3e-17
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 89 6e-17
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 79 9e-17
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 85 1e-15
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 80 5e-14
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 75 2e-12
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 70 4e-11
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 67 3e-10
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 67 3e-10
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 66 6e-10
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 62 8e-09
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 61 2e-08
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 60 5e-08
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 56 7e-07
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 55 2e-06
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 52 1e-05
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 46 7e-04
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 44 0.004
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 42 0.009
UniRef50_Q9RH14 Cluster: Putative uncharacterized protein; n=2; ... 35 1.8
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 35 1.8
UniRef50_UPI0000D55A40 Cluster: PREDICTED: similar to CG33232-PC... 33 5.4
UniRef50_Q8T248 Cluster: Similar to Dictyostelium discoideum (Sl... 33 5.4
UniRef50_Q1JVH7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 256 bits (626), Expect = 4e-67
Identities = 122/174 (70%), Positives = 133/174 (76%)
Frame = +3
Query: 93 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 272
RNYDLGNGV+RFSKS+M+HKKA YKF+G TVVVKQIGGEKNGGTRTV L
Sbjct: 30 RNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPL 89
Query: 273 KSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 452
K RKSFYPTQ+KIR S G+ FSKHVRR RPNL GTVCILLAGRHAGKR
Sbjct: 90 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 149
Query: 453 XXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKNKKSVK 614
TGPFAFN+CPLRRIPQRYVIGTST++ LG+FKLP H +D YFKKNKK VK
Sbjct: 150 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVK 203
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 177 bits (431), Expect = 2e-43
Identities = 87/169 (51%), Positives = 109/169 (64%)
Frame = +3
Query: 96 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 275
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 276 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 455
K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142
Query: 456 XXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKNK 602
TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF++ K
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLK 191
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 149 bits (361), Expect = 5e-35
Identities = 79/176 (44%), Positives = 101/176 (57%), Gaps = 6/176 (3%)
Frame = +3
Query: 93 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 260
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 261 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 434
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 435 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKNK 602
TGP N PLRR Q++VI TSTK+D+ + K+P HL DAYFKK K
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKK 221
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 145 bits (351), Expect = 8e-34
Identities = 77/172 (44%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Frame = +3
Query: 93 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 272
+N+ L GV FS+S+M+HK+ ++K V VK++ GEKNGG R + L
Sbjct: 26 KNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLPL 85
Query: 273 KSRKSFYPTQDKIRGR--SHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXX 446
K + YPT+D + + SH K S+ R +TPGTV ILLAG H GKR
Sbjct: 86 KKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQLK 145
Query: 447 XXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKNK 602
TGP+ N CPLRRI Q YVI TSTK+DL KLP LDD YFK+NK
Sbjct: 146 TGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYFKRNK 197
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 132 bits (319), Expect = 6e-30
Identities = 74/176 (42%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Frame = +3
Query: 93 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 272
RN +L G+ R+S+S +Y K+A+YK T K IGG+KNGG R V +
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPV 69
Query: 273 KSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 452
+ +YPT+D R ++ K + + R ++TPGTV ILLAG H GKR
Sbjct: 70 QRESRYYPTEDVRRRLANRKK--PGMAKLRSSITPGTVLILLAGAHRGKRVVFLKQLNSG 127
Query: 453 XXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAH--LDDAYFKKNKKSVK 614
TGPF N PLRRIPQ YVI TST +D+ D KLP H D++YFK K K
Sbjct: 128 LLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESYFKGEPKKKK 183
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 105 bits (251), Expect = 1e-21
Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Frame = +3
Query: 216 VVVKQIGGEKNGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFS-KHVRRTRPNLTPGTVCI 392
V+ K+IGG+KNGGTR V + FYP + + R H + + K+ + R +L PGT+ I
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQK-RFHRRLVNNKNPPKIRKSLQPGTILI 102
Query: 393 LLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAH 572
LLAG + GKR +GP N PLRR+ Q+ VI TST++D+ + K+P H
Sbjct: 103 LLAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEH 162
Query: 573 LDDAYFKKNK 602
++D YF+++K
Sbjct: 163 INDTYFRRHK 172
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 101 bits (243), Expect = 1e-20
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 6/126 (4%)
Frame = +3
Query: 237 GEKNGGTRTVLLKSRKSF---YPTQD---KIRGRSHGKSFSKHVRRTRPNLTPGTVCILL 398
G + T+ L+K + F Y TQ K+R R K FS HVR+ R ++ PGTV ILL
Sbjct: 42 GLRTPKTKEALVKPKTRFPRSYVTQQGKRKLRLR-RAKCFSNHVRKIRSSIQPGTVLILL 100
Query: 399 AGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLD 578
AG H GKR TGPF +N PLRR+ Q YVI TST++D+ F +P H+D
Sbjct: 101 AGPHKGKRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHID 160
Query: 579 DAYFKK 596
D YF++
Sbjct: 161 DEYFRR 166
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 91.1 bits (216), Expect = 2e-17
Identities = 52/119 (43%), Positives = 64/119 (53%)
Frame = +3
Query: 252 GTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXX 431
G R + K+ K +IR + K K R ++TPGTV I+LAGR AGKR
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 432 XXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKNKKS 608
TGPF N PLRRI QRYVI TSTK+D+ K+ A ++DAYF KKS
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKS 170
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 90.6 bits (215), Expect = 3e-17
Identities = 52/133 (39%), Positives = 69/133 (51%)
Frame = +3
Query: 216 VVVKQIGGEKNGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCIL 395
++ K IGG KNGG R V K +YP DK K+ K + RP++ GT+ IL
Sbjct: 22 MIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVIL 80
Query: 396 LAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHL 575
LAG G R TGP+A N PL R+ QRYVI TST +D+ + +
Sbjct: 81 LAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-KKI 139
Query: 576 DDAYFKKNKKSVK 614
D+AYF+K +K K
Sbjct: 140 DNAYFRKPQKKKK 152
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 89.4 bits (212), Expect = 6e-17
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Frame = +3
Query: 336 FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQR 515
F+ H RR R ++TPG V ILLAGRH KR TGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 516 YVIGTSTKVDLGDFKLPAHLDDAYFK----KNKKSV 611
YVI T T++ + + K+P+ L+D +F+ K KKSV
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV 181
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 78.6 bits (185), Expect(2) = 9e-17
Identities = 48/125 (38%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +3
Query: 243 KNGGTRTVLLKSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKR 422
K G + K + P + G SK V R LTPGTV I+LAGRH GKR
Sbjct: 31 KKGEKKPKFTKDTSAKLPKLQR-NGTKFALGHSKTVT-LRKTLTPGTVLIVLAGRHKGKR 88
Query: 423 XXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKN 599
TGP N PLRRI Q +VI TS KV++ K+P H++D YFK+
Sbjct: 89 VVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKRK 148
Query: 600 KKSVK 614
+ K
Sbjct: 149 STAQK 153
Score = 30.7 bits (66), Expect(2) = 9e-17
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 93 RNYDLGNGVLRFSKSRMYHKK 155
RN+DL GVLRFS SR+ KK
Sbjct: 12 RNFDLSPGVLRFSASRLRLKK 32
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 85.4 bits (202), Expect = 1e-15
Identities = 58/168 (34%), Positives = 79/168 (47%)
Frame = +3
Query: 93 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 272
RN DL GV ++S+S+MYHK+ ++ + V +
Sbjct: 12 RNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPV------------- 58
Query: 273 KSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 452
+ FYP +D ++ + +K + R ++TPGTV I+LAGR GKR
Sbjct: 59 EKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
Query: 453 XXXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKK 596
TGPF N PLRR+ Q YVIGTSTKVD+ L DD YF K
Sbjct: 117 LLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLD-KFDDKYFGK 163
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 79.8 bits (188), Expect = 5e-14
Identities = 45/110 (40%), Positives = 57/110 (51%)
Frame = +3
Query: 276 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 455
S FYP D ++ R + + R ++TPGTV ILLAGR GKR
Sbjct: 49 SAPKFYPADD-VKPRQPSTR-KPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGL 106
Query: 456 XXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKNKK 605
TGPF N P+RR+ Q YVI TSTKVD+ + DD YF ++KK
Sbjct: 107 LLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNV-EKFDDKYFSRDKK 155
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 74.5 bits (175), Expect = 2e-12
Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = +3
Query: 213 TVVVKQIGGEKN--GGTRTVLLKSRKS--FYPTQDKIRGRSHGKSFSKHVRRTRPNLTPG 380
T+ K +G K G R + S+K+ +YP D+ + + K+ H + RP+L PG
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARKT--AHPTKLRPSLQPG 61
Query: 381 TVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVDL 548
T+ ILLAGR GKR TGPF N PLRR+ RYVI TS+ VDL
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDL 117
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/87 (40%), Positives = 48/87 (55%)
Frame = +3
Query: 354 RTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 533
+ R +L PG VCILLAG + GKR TGP+A N P+RR+ Y+I TS
Sbjct: 34 KLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGVPVRRVNPAYIIATS 93
Query: 534 TKVDLGDFKLPAHLDDAYFKKNKKSVK 614
TKVD+ + + D YFK ++ +K
Sbjct: 94 TKVDVSKADV-SKFTDEYFKVDRSKLK 119
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/77 (46%), Positives = 41/77 (53%)
Frame = +3
Query: 366 NLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKVD 545
++TP TV I+L GRH GKR TGP A N PL R+ Q VI T TKVD
Sbjct: 8 SITPQTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVD 67
Query: 546 LGDFKLPAHLDDAYFKK 596
+ K HL DA FKK
Sbjct: 68 ICKVKTSKHLTDASFKK 84
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 67.3 bits (157), Expect = 3e-10
Identities = 41/109 (37%), Positives = 55/109 (50%)
Frame = +3
Query: 288 FYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFT 467
+YP++D + K+ ++ R +L PGTV ILLAGR GKR +
Sbjct: 9 WYPSEDVAALKKTRKA--ARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLIS 66
Query: 468 GPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKNKKSVK 614
GPF N PLRR+ RYVI TSTKV + + + YF K K + K
Sbjct: 67 GPFKVNGVPLRRVNARYVIATSTKVSVEGVNV-EKFNVEYFAKEKLTKK 114
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 66.1 bits (154), Expect = 6e-10
Identities = 39/88 (44%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +3
Query: 360 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTK 539
R L PGTV ILLAGR GKR TGPF N PLRR+ RYVI TS K
Sbjct: 36 RSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRRVNARYVIATSQK 95
Query: 540 VDLG---DFKLPAHLDDAYFKKNKKSVK 614
VDL + K+ YF K K
Sbjct: 96 VDLAGIDEAKINEIAQPKYFTAEKSKEK 123
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 62.5 bits (145), Expect = 8e-09
Identities = 32/72 (44%), Positives = 40/72 (55%)
Frame = +3
Query: 327 GKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRI 506
G+ ++ V + R +L PG V ILL G + GKR TGPF+FN PLRR+
Sbjct: 31 GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSGLLLVTGPFSFNGVPLRRV 89
Query: 507 PQRYVIGTSTKV 542
RYVI TST V
Sbjct: 90 NSRYVIATSTNV 101
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/82 (40%), Positives = 42/82 (51%)
Frame = +3
Query: 357 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 536
T + PG V ILL+GR GKR TGPF N PL+R+ YVI TST
Sbjct: 54 TLRKIVPGQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTST 113
Query: 537 KVDLGDFKLPAHLDDAYFKKNK 602
KVD+ ++D YFK+ +
Sbjct: 114 KVDVTGVN-ANQINDDYFKRTQ 134
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 59.7 bits (138), Expect = 5e-08
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 462 FTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKKNK 602
F GPF+ N P+RRI Q++V+ TSTK+D+ K+PA + D YFK+ K
Sbjct: 13 FLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTK 59
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 56.0 bits (129), Expect = 7e-07
Identities = 45/151 (29%), Positives = 65/151 (43%)
Frame = +3
Query: 93 RNYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLL 272
RN L G R+S +Y +K Y V V+K + G+KNGGT V L
Sbjct: 49 RNPILVRGTGRYSIKALYERK--YSAVKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKL 106
Query: 273 KSRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXX 452
+ K + + + +F KH + N TP TV I++ G+H +R
Sbjct: 107 QKMKMYL---GSCKAMAKSPAF-KH-EKAVCNSTPETVLIIITGQH--RRVVFLKQLSRG 159
Query: 453 XXXFTGPFAFNACPLRRIPQRYVIGTSTKVD 545
TGP A N L R Q+ V+ TST ++
Sbjct: 160 FLLITGPLALNLVLLYRTHQKSVVITSTTIN 190
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 54.8 bits (126), Expect = 2e-06
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Frame = +3
Query: 219 VVKQIGGEKNGGTRTVLLKSRKSFYPTQDK--IRGRSHGKSFS---KHV--RRTRPNLTP 377
VV G +KN V+ +K P + K I + +G+ + K V R+ R ++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 378 GTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTSTKV 542
G V I+L G+H GKR GP+ N PL+R+ RY+I TST +
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 360 RPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXF-TGPFAFNACPLRRIPQRYVIGTST 536
R + PG + I+LAGR G+R +GP +N P+RRI RYVI TST
Sbjct: 30 RKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATST 89
Query: 537 KVDL 548
VD+
Sbjct: 90 TVDI 93
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 46.0 bits (104), Expect = 7e-04
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +3
Query: 465 TGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFKK 596
TG F N PLRR+ Q YVI TSTKVD+ + DD YF K
Sbjct: 172 TGSFKINGVPLRRVNQAYVIATSTKVDIPKVNV-EKFDDKYFAK 214
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 43.6 bits (98), Expect = 0.004
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = +3
Query: 357 TRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTST 536
TRP+L GTV I++ G H GKR GP P+ I Q Y+I TST
Sbjct: 52 TRPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGP----VVPVNEISQDYLIATST 107
Query: 537 KVDLGDFKLPAHLDDAYFK 593
+++ A ++ A K
Sbjct: 108 SIEVAANATEAQVEAAAAK 126
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 42.3 bits (95), Expect = 0.009
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +3
Query: 348 VRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGPFAFNACPLRRIPQRYVIG 527
VRRT +L G V ++L G A +R GP + N PL RI +RY++
Sbjct: 22 VRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSINGIPLFRIDERYLLA 79
Query: 528 TSTKVDL 548
TST +DL
Sbjct: 80 TSTVLDL 86
>UniRef50_Q9RH14 Cluster: Putative uncharacterized protein; n=2;
Zymomonas mobilis|Rep: Putative uncharacterized protein
- Zymomonas mobilis
Length = 390
Score = 34.7 bits (76), Expect = 1.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 311 DLVLSGVE*FPAFQQDCTSASILFTAYLLNHDGWFLG 201
+ LS + F A QD TSA I + YLL H WF G
Sbjct: 339 EYALSDIVYFGALLQDKTSADIAYYDYLLGHSRWFSG 375
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 357 TRPNLTPGTVCILLAGRHAGKR 422
++P + PG VCI+L GRHAGK+
Sbjct: 2 SQPIIKPGLVCIVLQGRHAGKK 23
>UniRef50_UPI0000D55A40 Cluster: PREDICTED: similar to CG33232-PC,
isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG33232-PC, isoform C - Tribolium castaneum
Length = 2178
Score = 33.1 bits (72), Expect = 5.4
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -2
Query: 590 KVGIVKMRR*LEIAQVYLSR-CSNDIALRNPAQGTRVESKRSSEE*QTTRQHSNE 429
K GI+K RR L+ +QV R CS D+A + P + ++++R S + TR S E
Sbjct: 392 KQGILKKRRSLDESQVMRHRSCSPDVANKAPDSRSILKNQRRSSMEELTRTQSPE 446
>UniRef50_Q8T248 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein - Dictyostelium
discoideum (Slime mold)
Length = 1723
Score = 33.1 bits (72), Expect = 5.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 88 NRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKSPRNQPS 219
N G TSE + ++ + G T +++ + +R R SPR QP+
Sbjct: 1569 NNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPT 1612
>UniRef50_Q1JVH7 Cluster: Putative uncharacterized protein; n=1;
Desulfuromonas acetoxidans DSM 684|Rep: Putative
uncharacterized protein - Desulfuromonas acetoxidans DSM
684
Length = 181
Score = 32.3 bits (70), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 248 WRHSYSPAEKQEIILPHSGQDQGSFSWQE 334
W + PA +Q ++L +SG+D GS W +
Sbjct: 66 WAIQFDPAGRQYVVLSNSGEDAGSEDWTD 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,270,688
Number of Sequences: 1657284
Number of extensions: 12395835
Number of successful extensions: 32514
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 31404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32491
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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