Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O15
         (600 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q99K70-2 Cluster: Isoform 2 of Q99K70 ; n=1; Mus muscul...   130   2e-29
UniRef50_Q9NQL2 Cluster: Ras-related GTP-binding protein D; n=71...   128   7e-29
UniRef50_Q5DHJ9 Cluster: SJCHGC05063 protein; n=1; Schistosoma j...   105   6e-22
UniRef50_A2QAA2 Cluster: Similarity to hypothetical Ras-like GTP...   101   1e-20
UniRef50_Q0CMC9 Cluster: GTP-binding protein GTR2; n=13; Pezizom...    97   2e-19
UniRef50_Q9TVH6 Cluster: Putative uncharacterized protein; n=2; ...    76   6e-13
UniRef50_P53290 Cluster: GTP-binding protein GTR2; n=13; Sacchar...    70   5e-11
UniRef50_Q4Q0H2 Cluster: Small GTPase, putative; n=6; Trypanosom...    69   8e-11
UniRef50_Q0V1T5 Cluster: Putative uncharacterized protein; n=1; ...    52   8e-06
UniRef50_Q4PA99 Cluster: Putative uncharacterized protein; n=1; ...    48   1e-04
UniRef50_A0DFQ8 Cluster: Chromosome undetermined scaffold_49, wh...    43   0.006
UniRef50_UPI0000499AF6 Cluster: GTP-binding protein; n=1; Entamo...    39   0.10 
UniRef50_A3FPV3 Cluster: T24f1.1 protein, putative; n=3; Cryptos...    36   0.97 
UniRef50_Q5KN41 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q5CV88 Cluster: RagC like small GTpase of the Ras super...    34   2.9  

>UniRef50_Q99K70-2 Cluster: Isoform 2 of Q99K70 ; n=1; Mus
           musculus|Rep: Isoform 2 of Q99K70 - Mus musculus (Mouse)
          Length = 182

 Score =  130 bits (314), Expect = 2e-29
 Identities = 62/82 (75%), Positives = 69/82 (84%)
 Frame = +3

Query: 354 TNKPRYSS*WAVRRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDF 533
           ++KPR      +RRSGKSSIQKVVFHKMSPNETLFLESTNKI +DDI NSSFV FQIWDF
Sbjct: 58  SSKPRILL-MGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDF 116

Query: 534 PGQIDFFDPTFDSDTMFGGCGA 599
           PGQ+DFFDPTFD + +F G GA
Sbjct: 117 PGQMDFFDPTFDYEMIFRGTGA 138


>UniRef50_Q9NQL2 Cluster: Ras-related GTP-binding protein D; n=71;
           Eukaryota|Rep: Ras-related GTP-binding protein D - Homo
           sapiens (Human)
          Length = 400

 Score =  128 bits (310), Expect = 7e-29
 Identities = 58/71 (81%), Positives = 64/71 (90%)
 Frame = +3

Query: 387 VRRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDPTF 566
           +RRSGKSSIQKVVFHKMSPNETLFLESTNKI ++D+ NSSFV FQIWDFPGQIDFFDPTF
Sbjct: 70  LRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSNSSFVNFQIWDFPGQIDFFDPTF 129

Query: 567 DSDTMFGGCGA 599
           D + +F G GA
Sbjct: 130 DYEMIFRGTGA 140


>UniRef50_Q5DHJ9 Cluster: SJCHGC05063 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05063 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 200

 Score =  105 bits (253), Expect = 6e-22
 Identities = 46/66 (69%), Positives = 57/66 (86%)
 Frame = +3

Query: 387 VRRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDPTF 566
           +RRSGKSSIQ+VVFHKM+PNETLFLEST+KI ++D+   SF++FQIWDFPG IDF D TF
Sbjct: 71  LRRSGKSSIQRVVFHKMAPNETLFLESTHKIEKNDVSECSFIKFQIWDFPGHIDFCDETF 130

Query: 567 DSDTMF 584
            S+ +F
Sbjct: 131 QSEAIF 136


>UniRef50_A2QAA2 Cluster: Similarity to hypothetical Ras-like
           GTP-binding protein RagC - Homo sapiens; n=1;
           Aspergillus niger|Rep: Similarity to hypothetical
           Ras-like GTP-binding protein RagC - Homo sapiens -
           Aspergillus niger
          Length = 384

 Score =  101 bits (242), Expect = 1e-20
 Identities = 47/80 (58%), Positives = 61/80 (76%)
 Frame = +3

Query: 360 KPRYSS*WAVRRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPG 539
           KPR      +RRSGKSSI  VVFHKM PNETLFLEST +I +D I+  SF+ FQ+WDFPG
Sbjct: 60  KPRLML-MGLRRSGKSSIASVVFHKMPPNETLFLESTTRIQKDSIH--SFMDFQVWDFPG 116

Query: 540 QIDFFDPTFDSDTMFGGCGA 599
           Q+++ +P+FD +++FG  GA
Sbjct: 117 QLEYLEPSFDLESIFGSLGA 136


>UniRef50_Q0CMC9 Cluster: GTP-binding protein GTR2; n=13;
           Pezizomycotina|Rep: GTP-binding protein GTR2 -
           Aspergillus terreus (strain NIH 2624)
          Length = 377

 Score = 97.5 bits (232), Expect = 2e-19
 Identities = 43/69 (62%), Positives = 55/69 (79%)
 Frame = +3

Query: 393 RSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDPTFDS 572
           RSGKSSI  VVFHKM PNETLFLEST +I +D I+  SF+ FQ+WDFPGQ+++ +P+FD 
Sbjct: 52  RSGKSSIASVVFHKMPPNETLFLESTTRIQKDSIH--SFMDFQVWDFPGQLEYTEPSFDL 109

Query: 573 DTMFGGCGA 599
           + +FG  GA
Sbjct: 110 EAIFGSLGA 118


>UniRef50_Q9TVH6 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 338

 Score = 76.2 bits (179), Expect = 6e-13
 Identities = 38/70 (54%), Positives = 51/70 (72%)
 Frame = +3

Query: 390 RRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDPTFD 569
           +RSGK+SI+KVVF KMSPNET+F+EST +I +D I  SSF+ F+  +FPGQ+  FD + D
Sbjct: 35  KRSGKTSIRKVVFQKMSPNETMFVESTARITRDTIC-SSFINFETIEFPGQMCPFDDSLD 93

Query: 570 SDTMFGGCGA 599
              +F  C A
Sbjct: 94  PVGVFQKCEA 103


>UniRef50_P53290 Cluster: GTP-binding protein GTR2; n=13;
           Saccharomycetales|Rep: GTP-binding protein GTR2 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 341

 Score = 69.7 bits (163), Expect = 5e-11
 Identities = 32/71 (45%), Positives = 49/71 (69%)
 Frame = +3

Query: 387 VRRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDPTF 566
           VRR GKSSI KVVFH M P +TL+LEST+    +  + S+ +   + + PGQ+++F+P++
Sbjct: 17  VRRCGKSSICKVVFHNMQPLDTLYLESTSNPSLE--HFSTLIDLAVMELPGQLNYFEPSY 74

Query: 567 DSDTMFGGCGA 599
           DS+ +F   GA
Sbjct: 75  DSERLFKSVGA 85


>UniRef50_Q4Q0H2 Cluster: Small GTPase, putative; n=6;
           Trypanosomatidae|Rep: Small GTPase, putative -
           Leishmania major
          Length = 365

 Score = 68.9 bits (161), Expect = 8e-11
 Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
 Frame = +3

Query: 387 VRRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDPT- 563
           +R+SGKSSIQKVVF  M P+++  L +T +  +  ++++ FV F++WDFPGQ D FD + 
Sbjct: 16  LRKSGKSSIQKVVFEGMQPHDSATLATTVQPEKSTVHSNDFVNFEVWDFPGQNDPFDSSN 75

Query: 564 ---FDSDTMFGGCGA 599
              +D + +   CGA
Sbjct: 76  ASRYDVNQLLENCGA 90


>UniRef50_Q0V1T5 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 628

 Score = 52.4 bits (120), Expect = 8e-06
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = +3

Query: 501 SSFVQFQIWDFPGQIDFFDPTFDSDTMFGGCGA 599
           SSF+ FQ+WD PG +D+FDP FD+D +F   GA
Sbjct: 46  SSFMDFQVWDLPGHLDYFDPAFDTDNIFEEIGA 78


>UniRef50_Q4PA99 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 512

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 24/53 (45%), Positives = 38/53 (71%)
 Frame = +3

Query: 387 VRRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQI 545
           +RRSGKSSI  VV++++ P++T+FLEST K   + I + SF+  +I D P ++
Sbjct: 13  LRRSGKSSILNVVYNELHPDDTVFLESTTK--PNFILSDSFLPIRIIDTPSRV 63


>UniRef50_A0DFQ8 Cluster: Chromosome undetermined scaffold_49, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_49,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 305

 Score = 42.7 bits (96), Expect = 0.006
 Identities = 19/60 (31%), Positives = 35/60 (58%)
 Frame = +3

Query: 381 WAVRRSGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDP 560
           + + +SGK+S+ +V+F K+    T  L+ TN++    +   S + F+I++F G  D  DP
Sbjct: 8   FGLTKSGKTSMIRVIFQKLEIFRTFQLDPTNRMESVAVNLGSHIHFKIYEFSGHYDLNDP 67


>UniRef50_UPI0000499AF6 Cluster: GTP-binding protein; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: GTP-binding protein -
           Entamoeba histolytica HM-1:IMSS
          Length = 305

 Score = 38.7 bits (86), Expect = 0.10
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = +3

Query: 399 GKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQI 545
           GKSSI ++VF K +P ET  L+ T  I +  I   + +  ++WD PG I
Sbjct: 16  GKSSIHRIVFGKKTPGETTNLKPTLHIQKIKIEGLNSM-MEVWDIPGSI 63


>UniRef50_A3FPV3 Cluster: T24f1.1 protein, putative; n=3;
           Cryptosporidium|Rep: T24f1.1 protein, putative -
           Cryptosporidium parvum Iowa II
          Length = 340

 Score = 35.5 bits (78), Expect = 0.97
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 396 SGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDPTFDS 572
           +GK+S++ ++F    P +T  L +TN I    +     +   +WD  GQ  F +  F+S
Sbjct: 16  AGKTSMRSIIFANYLPKDTSRLTATNNIEHSHLRFFGNMVLSLWDCGGQDIFMENYFES 74


>UniRef50_Q5KN41 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 379

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +3

Query: 396 SGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQFQIWDFPGQIDFFDPTFDS- 572
           SGK+S++ V+F   S  +T  L +T  + Q  +     +   +WD  GQ  F D    S 
Sbjct: 17  SGKTSMRSVIFSNFSAKDTRRLGATIDVEQSAVRFLGGLVLNLWDCGGQSAFVDNYLSSQ 76

Query: 573 -DTMF 584
            DT+F
Sbjct: 77  KDTIF 81


>UniRef50_Q5CV88 Cluster: RagC like small GTpase of the Ras
           superfamily; n=2; Cryptosporidium|Rep: RagC like small
           GTpase of the Ras superfamily - Cryptosporidium parvum
           Iowa II
          Length = 378

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 396 SGKSSIQKVVFHKMSPNETLFLESTNKIVQDDIYNSSFVQ--FQIWDFPGQIDFFDPTFD 569
           SGK+SI KV++ K+SP+ET+ L  T       I N S +   F I D PG     D    
Sbjct: 78  SGKTSIIKVLYDKVSPHETVSLYPTQSGSITLIKNESKILPCFGIIDLPGTGQIQDSLLG 137

Query: 570 SD 575
            D
Sbjct: 138 ED 139


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,148,165
Number of Sequences: 1657284
Number of extensions: 8643686
Number of successful extensions: 19764
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19758
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)