Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O14
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    30   0.011
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    30   0.011
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    30   0.011
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 0.011
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 306 PVHSISYITGLWVTLTHSSIT 368
           P+H+ SY+TG+WV L + S T
Sbjct: 122 PIHTSSYMTGIWVWLINISAT 142


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 0.011
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 306 PVHSISYITGLWVTLTHSSIT 368
           P+H+ SY+TG+WV L + S T
Sbjct: 355 PIHTSSYMTGIWVWLINISAT 375


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 0.011
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 306 PVHSISYITGLWVTLTHSSIT 368
           P+H+ SY+TG+WV L + S T
Sbjct: 355 PIHTSSYMTGIWVWLINISAT 375


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 470 IKLAIVKECDYFLNDNIIEFNRRRNEVSLEDK 375
           IKL + KE +  L+D+  E  ++  E   +DK
Sbjct: 211 IKLVVEKEREKELSDDEAEEEKKEEEGEDKDK 242


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 223 LGAATVNHSTSTPSCPVRLTFTKPRLRDPC 312
           LG+  + H        V L  ++P+L  PC
Sbjct: 9   LGSMDIKHEMIYREDDVLLVKSEPQLHSPC 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,210
Number of Sequences: 336
Number of extensions: 1766
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)