Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O12
(283 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for ... 84 9e-17
L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 84 9e-17
L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 84 9e-17
EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1 ... 84 9e-17
CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein. 84 9e-17
CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein. 84 9e-17
BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,... 84 9e-17
BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,... 84 9e-17
AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,... 84 9e-17
AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase pr... 84 9e-17
AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide dism... 84 9e-17
X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxid... 51 6e-07
L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase prot... 48 6e-06
CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein. 45 4e-05
BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for su... 45 4e-05
BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for su... 45 4e-05
AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase co... 45 4e-05
AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for su... 45 4e-05
EF143990-1|ABL96474.1| 36|Homo sapiens superoxide dismutase 1 ... 32 0.39
BC056143-1|AAH56143.1| 958|Homo sapiens DIS3 mitotic control ho... 29 2.7
BC038101-1|AAH38101.1| 796|Homo sapiens DIS3 protein protein. 29 2.7
AL391384-2|CAI15671.1| 928|Homo sapiens DIS3 mitotic control ho... 29 2.7
AL391384-1|CAI15670.1| 958|Homo sapiens DIS3 mitotic control ho... 29 2.7
AL138695-2|CAH72708.1| 928|Homo sapiens DIS3 mitotic control ho... 29 2.7
AL138695-1|CAH72709.1| 958|Homo sapiens DIS3 mitotic control ho... 29 2.7
AF330044-1|AAL37479.1| 958|Homo sapiens KIAA1008 protein protein. 29 2.7
AB023225-1|BAA76852.2| 935|Homo sapiens KIAA1008 protein protein. 29 2.7
X01780-1|CAA25915.1| 24|Homo sapiens protein ( Human superoxid... 28 6.3
BC006510-1|AAH06510.1| 433|Homo sapiens cyclin B1 protein. 28 6.3
AY338491-1|AAP88038.1| 433|Homo sapiens cyclin B1 protein. 28 6.3
U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase prot... 27 8.4
J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein. 27 8.4
CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein. 27 8.4
BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,... 27 8.4
AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,... 27 8.4
>X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for
Cu/Zn superoxide dismutase (SOD). ).
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1
protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase
protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide
dismutase 1 protein.
Length = 154
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
M KAVCVL GD V G + F+QK+ + PV V G +KGL++G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 2. ).
Length = 32
Score = 51.2 bits (117), Expect = 6e-07
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 176 DESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 268
+ + PV V G +KGL++G HGFHVHEFGDNT
Sbjct: 1 ESNGPVKVWGSIKGLTEGLHGFHVHEFGDNT 31
>L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase
protein.
Length = 32
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 176 DESSPVVVSGEVKGLSKGKHGFHVHEFGDNT 268
+ + PV V G +KGL++G HGFHV EFGDNT
Sbjct: 1 ESNGPVKVWGSIKGLTEGLHGFHVQEFGDNT 31
>CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein.
Length = 274
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2
Query: 140 GDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
G V G V F Q ++ G + GL G HG HVH++GD TN C S
Sbjct: 97 GTVQGVVRFLQLTPER-CLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2
Query: 140 GDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
G V G V F Q ++ G + GL G HG HVH++GD TN C S
Sbjct: 97 GTVQGVVRFLQLTPER-CLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2
Query: 140 GDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
G V G V F Q ++ G + GL G HG HVH++GD TN C S
Sbjct: 97 GTVQGVVRFLQLTPER-CLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase
copper chaperone protein.
Length = 274
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2
Query: 140 GDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
G V G V F Q ++ G + GL G HG HVH++GD TN C S
Sbjct: 97 GTVQGVVRFLQLTPER-CLIDGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2
Query: 140 GDVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTS 283
G V G V F Q ++ G + GL G HG HVH++GD TN C S
Sbjct: 97 GTVQGVVRFLQLTPER-CLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>EF143990-1|ABL96474.1| 36|Homo sapiens superoxide dismutase 1
protein.
Length = 36
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQKDESSP 190
M KAVCVL GD V G + F+QK+ + P
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGP 29
>BC056143-1|AAH56143.1| 958|Homo sapiens DIS3 mitotic control homolog
(S. cerevisiae) protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IFYGMPAKAVCVLHGDVSGTVFFDQKDESSP-VVVSGEVKGLSKGKHGFHVHE 253
+F A V + + GTVFF++KD+ +P ++ E+ L FHV +
Sbjct: 853 LFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFD 905
>BC038101-1|AAH38101.1| 796|Homo sapiens DIS3 protein protein.
Length = 796
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IFYGMPAKAVCVLHGDVSGTVFFDQKDESSP-VVVSGEVKGLSKGKHGFHVHE 253
+F A V + + GTVFF++KD+ +P ++ E+ L FHV +
Sbjct: 691 LFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFD 743
>AL391384-2|CAI15671.1| 928|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae) protein.
Length = 928
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IFYGMPAKAVCVLHGDVSGTVFFDQKDESSP-VVVSGEVKGLSKGKHGFHVHE 253
+F A V + + GTVFF++KD+ +P ++ E+ L FHV +
Sbjct: 823 LFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFD 875
>AL391384-1|CAI15670.1| 958|Homo sapiens DIS3 mitotic control homolog
(S. cerevisiae) protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IFYGMPAKAVCVLHGDVSGTVFFDQKDESSP-VVVSGEVKGLSKGKHGFHVHE 253
+F A V + + GTVFF++KD+ +P ++ E+ L FHV +
Sbjct: 853 LFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFD 905
>AL138695-2|CAH72708.1| 928|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae) protein.
Length = 928
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IFYGMPAKAVCVLHGDVSGTVFFDQKDESSP-VVVSGEVKGLSKGKHGFHVHE 253
+F A V + + GTVFF++KD+ +P ++ E+ L FHV +
Sbjct: 823 LFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFD 875
>AL138695-1|CAH72709.1| 958|Homo sapiens DIS3 mitotic control homolog
(S. cerevisiae) protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IFYGMPAKAVCVLHGDVSGTVFFDQKDESSP-VVVSGEVKGLSKGKHGFHVHE 253
+F A V + + GTVFF++KD+ +P ++ E+ L FHV +
Sbjct: 853 LFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFD 905
>AF330044-1|AAL37479.1| 958|Homo sapiens KIAA1008 protein protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IFYGMPAKAVCVLHGDVSGTVFFDQKDESSP-VVVSGEVKGLSKGKHGFHVHE 253
+F A V + + GTVFF++KD+ +P ++ E+ L FHV +
Sbjct: 853 LFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFD 905
>AB023225-1|BAA76852.2| 935|Homo sapiens KIAA1008 protein protein.
Length = 935
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 98 IFYGMPAKAVCVLHGDVSGTVFFDQKDESSP-VVVSGEVKGLSKGKHGFHVHE 253
+F A V + + GTVFF++KD+ +P ++ E+ L FHV +
Sbjct: 830 LFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFD 882
>X01780-1|CAA25915.1| 24|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 1 and 5' flanking region.
).
Length = 24
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 110 MPAKAVCVLHGD--VSGTVFFDQK 175
M KAVCVL GD V G + F+QK
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQK 24
>BC006510-1|AAH06510.1| 433|Homo sapiens cyclin B1 protein.
Length = 433
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = -1
Query: 178 ILLVEENCSTHISVKNAYSFSRHA 107
+++V + + H++VKN Y+ S+HA
Sbjct: 387 VVMVNQGLTKHMTVKNKYATSKHA 410
>AY338491-1|AAP88038.1| 433|Homo sapiens cyclin B1 protein.
Length = 433
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = -1
Query: 178 ILLVEENCSTHISVKNAYSFSRHA 107
+++V + + H++VKN Y+ S+HA
Sbjct: 387 VVMVNQGLTKHMTVKNKYATSKHA 410
>U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase
protein.
Length = 240
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 146 VSGTVFFDQKDESSPVVVSGEVKGL----SKGKHGFHVHEFGDNTNGCTS 283
V+G V F Q + + ++G + HVH+FGD + GC S
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 146 VSGTVFFDQKDESSPVVVSGEVKGL----SKGKHGFHVHEFGDNTNGCTS 283
V+G V F Q + + ++G + HVH+FGD + GC S
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 146 VSGTVFFDQKDESSPVVVSGEVKGL----SKGKHGFHVHEFGDNTNGCTS 283
V+G V F Q + + ++G + HVH+FGD + GC S
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 146 VSGTVFFDQKDESSPVVVSGEVKGL----SKGKHGFHVHEFGDNTNGCTS 283
V+G V F Q + + ++G + HVH+FGD + GC S
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 146 VSGTVFFDQKDESSPVVVSGEVKGL----SKGKHGFHVHEFGDNTNGCTS 283
V+G V F Q + + ++G + HVH+FGD + GC S
Sbjct: 78 VTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,658,283
Number of Sequences: 237096
Number of extensions: 610877
Number of successful extensions: 1839
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1828
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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