Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O12
         (283 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           23   0.94 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    20   5.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    20   6.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   8.8  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    19   8.8  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    19   8.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   8.8  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   8.8  

>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 0.94
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +2

Query: 212 KGLSKGKHGFHVHEFGDNTNGCT 280
           KGL KG    H    GDN  G T
Sbjct: 9   KGLGKGGAKRHRKVLGDNIQGIT 31


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 194 VVSGEVKGLSKGKHGFHVHEFGDNT 268
           V SGE   +   K GFH+  + +N+
Sbjct: 191 VHSGEEVNIFLDKKGFHMDGYTNNS 215


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 182 FHPFGRRKLFHSHLREE 132
           F PFGR KL ++   EE
Sbjct: 589 FSPFGRFKLANTDGTEE 605


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 89  QSHIFYGMPAKAVCVLHG 142
           Q H FY  P  +   LHG
Sbjct: 349 QHHFFYPDPLASKYELHG 366


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 110 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVS 202
           + A  V +L  DVS       K ES+  VVS
Sbjct: 10  LAAFCVAMLVSDVSAKTSISVKGESNVDVVS 40


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 110 MPAKAVCVLHGDVSGTVFFDQKDESSPVVVS 202
           + A  V +L  DVS       K ES+  VVS
Sbjct: 10  LAAFCVAMLVSDVSAKTSISVKGESNVDVVS 40


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 95  HIFYGMP 115
           H+FYG+P
Sbjct: 60  HVFYGIP 66


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 95  HIFYGMP 115
           H+FYG+P
Sbjct: 60  HVFYGIP 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,178
Number of Sequences: 438
Number of extensions: 1251
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)