Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O10
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    25   0.65 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   0.86 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.6  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 602 VDIGMWLSNNKIKAPINMNTACRAN 528
           + IG W + N I API  +   RAN
Sbjct: 100 ISIGGWNAGNAILAPIAASPELRAN 124


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -1

Query: 455 NVPKASCRPTSPRPNEVSRVAITHAAPNRARPAVGHMSAITLNIKYIQKV 306
           N+P          P +V R A      + + P V H +A  +NI+ +++V
Sbjct: 451 NMPSQYIHEPWTAPEQVQRAAKCIIGKDYSLPMVNHAAASRVNIQRMKQV 500


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 411 IRPR*CWPATRLRYIGIGNIPAVSWFSRGANAG 509
           +RP  C P +R+ Y  +G +      S GA AG
Sbjct: 139 VRPAACTPDSRVGYGSVGLVGGDPASSPGAAAG 171


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 541 AVFMLIGALILLFDSHMPIST 603
           A+F L   L+LLFD+++ IS+
Sbjct: 118 AIFNLYMVLLLLFDAYLWISS 138


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 163 PPDRLPNITQDNNTCSPAV 219
           PP    N  ++N TC PAV
Sbjct: 232 PPQLEVNERKENLTCQPAV 250


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = -1

Query: 467 IANPNVPKASCRPTSPRPNEVSRVAITHAAPNRARPAVGHMSAITLNIKYIQKVA 303
           + +P +   S   + P P ++S       +PN+    V +++ +T    Y Q V+
Sbjct: 316 VMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQIYQPVTNLTNLTYPSYYNQDVS 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,943
Number of Sequences: 336
Number of extensions: 3638
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)