Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O10
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 29 2.6
AF016679-5|AAB66157.1| 485|Caenorhabditis elegans Hypothetical ... 29 3.4
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 28 5.9
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 5.9
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 27 7.9
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 27 7.9
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 27 7.9
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 27 7.9
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 27 7.9
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 27 7.9
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 27 7.9
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 27 7.9
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 27 7.9
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1
Query: 130 YRTAGPSKCLVPPDRLPNITQDNNTCSPAVRCQV 231
Y TA P PP RLP IT T +PAVR V
Sbjct: 417 YPTAAPPT--PPPTRLPLITTIGTTTNPAVRTTV 448
>AF016679-5|AAB66157.1| 485|Caenorhabditis elegans Hypothetical
protein T28C12.2 protein.
Length = 485
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 412 LGRGDVGRQLAFGTLGLAIFPPLAGLAAEQM-PDTPFVIPFALHAVFMLIG-ALILLF 579
LG G F +LG +I P +A +++ + T + L +VF+L+G ALIL+F
Sbjct: 408 LGPRKQGTMQGFFSLGGSIAPVIASISSTAIFKYTGYRYVIVLQSVFLLVGAALILIF 465
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 476 GGNIANPNVPKASCRPTSPRP 414
G + ANPNV + P SPRP
Sbjct: 646 GSSSANPNVEYVTASPNSPRP 666
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 497 SAAKPANGGNIANPNVPKASCRPTSPRPNEVSRVAITHAAPNRARPAVGHM 345
SA P+ G + ++ P S +PT P P A + + P+ G M
Sbjct: 154 SATNPSAGSSASSTPTPYPSSQPTMPTPYPTGSGAAPYPPSSTPYPSAGAM 204
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 GRRSGGTKHFDGPAVRYVHQL--ESEVLLSSGRSGAVRDKGIRSFGT 45
GRR TK D Y H+ +SE+ L SG + KG+ FGT
Sbjct: 151 GRRET-TKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFGT 196
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 GRRSGGTKHFDGPAVRYVHQL--ESEVLLSSGRSGAVRDKGIRSFGT 45
GRR TK D Y H+ +SE+ L SG + KG+ FGT
Sbjct: 359 GRRET-TKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFGT 404
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 GRRSGGTKHFDGPAVRYVHQL--ESEVLLSSGRSGAVRDKGIRSFGT 45
GRR TK D Y H+ +SE+ L SG + KG+ FGT
Sbjct: 168 GRRET-TKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFGT 213
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 GRRSGGTKHFDGPAVRYVHQL--ESEVLLSSGRSGAVRDKGIRSFGT 45
GRR TK D Y H+ +SE+ L SG + KG+ FGT
Sbjct: 151 GRRET-TKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFGT 196
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 GRRSGGTKHFDGPAVRYVHQL--ESEVLLSSGRSGAVRDKGIRSFGT 45
GRR TK D Y H+ +SE+ L SG + KG+ FGT
Sbjct: 168 GRRET-TKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFGT 213
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 447 RYIGIGNIPAVSWFS--RGANAGYAF 518
RY G+GN+P V + ANAG+AF
Sbjct: 1152 RYNGLGNLPHVDGLPQFQNANAGFAF 1177
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 GRRSGGTKHFDGPAVRYVHQL--ESEVLLSSGRSGAVRDKGIRSFGT 45
GRR TK D Y H+ +SE+ L SG + KG+ FGT
Sbjct: 338 GRRET-TKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFGT 383
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 GRRSGGTKHFDGPAVRYVHQL--ESEVLLSSGRSGAVRDKGIRSFGT 45
GRR TK D Y H+ +SE+ L SG + KG+ FGT
Sbjct: 359 GRRET-TKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFGT 404
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -1
Query: 179 GRRSGGTKHFDGPAVRYVHQL--ESEVLLSSGRSGAVRDKGIRSFGT 45
GRR TK D Y H+ +SE+ L SG + KG+ FGT
Sbjct: 168 GRRET-TKMVDSKHPEYDHEKPDQSEIPLQSGTNKFASQKGMTGFGT 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,055,958
Number of Sequences: 27780
Number of extensions: 345205
Number of successful extensions: 862
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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