Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O10
         (605 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   1.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   5.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.4  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 451 TLGLAIFPPLAGLAAEQMPDTPFVIP 528
           T+   I+PP+ G  +  M   PF+IP
Sbjct: 839 TMAGVIYPPVIGTPSTGMMYKPFLIP 864


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = -1

Query: 593 GMWLSNNKIKAPI-NMNTA---CRANGITKGVSGICSAAKPANGGNIANP----NVPKAS 438
           G+ +S + IK  I N++ A   C    + K +SG+  AA       +AN      +P  S
Sbjct: 181 GLEMSVDFIKGSISNIDGAEDHCNKTAVRKVISGVVGAASSVTSIQVANLLRLFRIPLVS 240

Query: 437 CRPTSPRPNEVSR 399
              TSP  +   R
Sbjct: 241 FFSTSPELSNKQR 253


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +2

Query: 50  RNYEYLCPLRHLISPRTIALLIPTGVHIVRLDHQSAW 160
           R Y+ +  +   +S   I+ L   G  I+R   +++W
Sbjct: 120 RGYKCIIVMPEKMSDEKISTLYALGAKIIRTPTEASW 156


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 416 AAVMLAGNSPSVHWDWQYS 472
           AA  L GN+P V   W Y+
Sbjct: 400 AARKLLGNAPEVENIWDYT 418


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 458 PNVPKASCRPTSPRPNE 408
           PN P A C  T+ + N+
Sbjct: 226 PNQPSAQCEATTMQEND 242


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 505 PDTPFVIPFALHAVFMLIGALILLFDS 585
           P   FV+  A+   FM+I   I +++S
Sbjct: 82  PSNMFVVNLAICDFFMMIKTPIFIYNS 108


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 286 RVYIRHRPVHRLVRHKGREL 227
           ++Y  H  +HR   H G  L
Sbjct: 123 KIYANHCELHRAACHSGSSL 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,286
Number of Sequences: 438
Number of extensions: 4194
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)