Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O09
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.17 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.30 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.1  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   4.9  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   4.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   4.9  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.17
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 93  KLCLKSASPSYLTR*VTLIFHWMPCLP 13
           ++C+ + +P      +TLI  WMP LP
Sbjct: 483 RICVSAWNPKDCDPLITLIETWMPLLP 509


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.30
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 217 TRPPSISGALVISETSRTESPAFLSAVAV 131
           TR  +  G LVI+E   T++PAF + + V
Sbjct: 211 TRLSATKGRLVITEPVGTKAPAFSTDIKV 239


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 150 NAGLSVLDVSDITKAPEMLGGRVKTLH 230
           N  L+ L  +  TKA  ++ GR+ TLH
Sbjct: 556 NVQLTKLTKNCATKAQSVVLGRICTLH 582


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 147 SAQSLCHRYRLAEDPFQTKLC 85
           SA  + +R    E PF+ K+C
Sbjct: 148 SALQMHYRTHTGERPFKCKIC 168


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 126 RYRLAEDPFQTKLCLKSASPS 64
           R    E P++ KLCL   S S
Sbjct: 98  RIHSGEKPYECKLCLLRFSQS 118


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 126 RYRLAEDPFQTKLCLKSASPS 64
           R    E P++ KLCL   S S
Sbjct: 354 RIHSGEKPYECKLCLLRFSQS 374


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 205 SISGALVISETSRTESPAFLSAVAVPPLPTS*RPIS 98
           SI G +  S+  RT+      +  VPPL  S  P S
Sbjct: 90  SIGGGISASKRQRTDDWLSSPSGNVPPLTPSPGPPS 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,830
Number of Sequences: 336
Number of extensions: 1400
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)