Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O09
(354 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106,621... 101 2e-22
01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705 31 0.20
03_02_0565 - 9484045-9484335,9484621-9484686,9484790-9484867,948... 30 0.60
12_02_0117 - 13860418-13860524,13860612-13860810,13860969-138611... 29 1.1
08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271 28 1.8
05_01_0082 - 546134-546552,546755-547102,547192-547327,547404-54... 27 3.2
03_04_0051 + 16852980-16852991,16853952-16854033,16854108-16854763 27 3.2
02_04_0290 - 21627733-21628353,21628424-21628663,21628874-216292... 27 4.2
11_04_0064 - 13053642-13053791,13053845-13053915,13054123-130542... 27 5.6
10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643 27 5.6
06_03_1310 + 29238644-29240260 27 5.6
12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159... 26 7.4
05_05_0214 + 23319507-23321540 26 7.4
05_02_0012 - 5575574-5575849,5575889-5575954,5576103-5576926,557... 26 9.8
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 26 9.8
04_04_1249 - 32067644-32067787,32068245-32068346,32068415-320684... 26 9.8
01_01_0467 - 3446243-3446254,3446331-3446420,3446544-3446816,344... 26 9.8
>08_01_0703 +
6212409-6212456,6212661-6212742,6214031-6214106,
6214498-6214594,6214760-6214862,6214973-6215103,
6215285-6215462,6215528-6215715,6215945-6216154,
6216231-6216578,6216660-6216786,6217304-6217455
Length = 579
Score = 101 bits (241), Expect = 2e-22
Identities = 51/103 (49%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = +3
Query: 36 KLALLSVSDKTGLLILGKALSEMGLQLVGSGGTATALRNAGLSVLDVSDITKAPEMLGGR 215
K AL+S+SDKT L LG L +G ++ +GGTA++L AG++V V IT PEML GR
Sbjct: 46 KQALISLSDKTDLAYLGNGLQALGFSIISTGGTASSLEAAGVNVTKVEQITNFPEMLDGR 105
Query: 216 VKTLHPAVHAGILARLSNTDQ-EDMKRQNFDLISVVVCNLYPF 341
VKTLHP+VH GILAR + + VVV NLYPF
Sbjct: 106 VKTLHPSVHGGILARRDQEHHLKALNEHGIGTFDVVVVNLYPF 148
>01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705
Length = 1172
Score = 31.5 bits (68), Expect = 0.20
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +3
Query: 6 F*KADMASNGKLAL-----LSVSD--KTGLLILGKALSEMGLQLVGSGGTATALRNAGLS 164
F KA +A+ KL L LS++D K L +G+ E+G ++ + GTA L+ G+
Sbjct: 1012 FAKAQIAAGQKLPLNGTVFLSLNDLTKRHLAEIGRGFRELGFNIIATSGTAKVLQLEGIP 1071
Query: 165 VLDVSDI 185
V V I
Sbjct: 1072 VEPVLKI 1078
>03_02_0565 -
9484045-9484335,9484621-9484686,9484790-9484867,
9485005-9485157,9485271-9485356,9485445-9485551,
9485685-9485752,9485890-9485912,9487627-9487732,
9487772-9487899,9487989-9488065,9488126-9488131,
9488206-9488264
Length = 415
Score = 29.9 bits (64), Expect = 0.60
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 120 GSGGTATALRNAGLSVLDVSDITKAPEMLGGRVKT 224
G GGTAT LR GL V +S + GGR +T
Sbjct: 368 GGGGTATELRRRGLCVAALSPAVVSLAAEGGRRRT 402
>12_02_0117 -
13860418-13860524,13860612-13860810,13860969-13861148,
13861230-13861375,13862185-13862323,13863076-13863153,
13863654-13863722,13863806-13863925,13864792-13864875,
13864961-13865032,13865204-13865345,13866016-13866023
Length = 447
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 162 SVLDVSDITKAPEMLGGRVKTLHPAVHAGILARLSNTDQEDMKR-QNFDLISVVVCN 329
S +D+S I+ P GGRV +P A+L N + ++ R Q F+ + V C+
Sbjct: 85 SYVDISSISVVPSTTGGRVYHYYPFSALSDPAKLFNDLRWNISRPQGFEAVMRVRCS 141
>08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271
Length = 450
Score = 28.3 bits (60), Expect = 1.8
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -3
Query: 205 SISGALVISETSRTESPAFLSAVAVPPLPTS*RPISDKALPKISKPVLSDTL 50
S SGA+V ET R+E S+ PPLP I K K S + D L
Sbjct: 21 SSSGAMVRRETRRSEVGLEKSSSLPPPLPKEAVKIDKKKTKKRSDYSIEDIL 72
>05_01_0082 -
546134-546552,546755-547102,547192-547327,547404-547702,
548434-548500
Length = 422
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 232 GCKVFTRPPSISGALVISETSRTESPAFLSAVAVPPLPTS 113
G K+ + P S + TS+ S + +SA +VPP P S
Sbjct: 6 GAKISSESPCRSASSPSGGTSKYASNSSVSAASVPPTPRS 45
>03_04_0051 + 16852980-16852991,16853952-16854033,16854108-16854763
Length = 249
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 226 KVFTRPPSISGALVISETSRTESPAFLSAVAVPPLP 119
KV T +GAL E R E+P+ A A+ P P
Sbjct: 146 KVVTTTNHAAGALARMEGRRAEAPSMAMAAAMAPAP 181
>02_04_0290 -
21627733-21628353,21628424-21628663,21628874-21629214,
21630934-21631612,21631893-21631962,21632063-21632190
Length = 692
Score = 27.1 bits (57), Expect = 4.2
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -3
Query: 223 VFTRPPSISGALVISETSRTESPAFLSAVAVPPLPTS*RPISDKALPKISK--PVLSDTL 50
+FT IS AL S + S + A A P +PT+ R + D + +
Sbjct: 531 LFTEQVKISNALASSSAALRSSSSAPGADAAPAMPTTRRQLLDGTPQSFQEGWAAAKKDI 590
Query: 49 SNANFPLDAMSA 14
+ F L++M A
Sbjct: 591 NTLKFELESMKA 602
>11_04_0064 -
13053642-13053791,13053845-13053915,13054123-13054227,
13054269-13054275,13054614-13054906,13055064-13055142,
13055322-13055551,13055646-13055792,13055988-13056067,
13056318-13056651,13057155-13057227,13057727-13057750,
13058297-13058497
Length = 597
Score = 26.6 bits (56), Expect = 5.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 196 GALVISETSRTESPAFLSAVAVPPLPTS*RPISDKALPKISK 71
GAL ++ T+ T P + PL TS + + A+P+I +
Sbjct: 44 GALTLTATATTSHPTSALSATFSPLQTSRKILIVPAIPRIGE 85
>10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643
Length = 532
Score = 26.6 bits (56), Expect = 5.6
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -3
Query: 172 SRTESPAFLSAVAVPPLPTS*RPISDKALPKISKPVLSDTLSNANFPLDAMS 17
S T+ P+ SA+ PP PT RP+ D A P + P+L L AMS
Sbjct: 209 SSTDEPSTSSAL--PP-PTPPRPLPDMAGPSSATPLLPLQLPGLAGSSSAMS 257
>06_03_1310 + 29238644-29240260
Length = 538
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -3
Query: 217 TRPPSISGALVISETSR--TESPAFLSAVAVPPLPTS*RP 104
T PPS GA S +S TE P ++ PP PT+ P
Sbjct: 428 TSPPSSHGASPPSSSSSPPTEHPGYVLPPLTPPPPTTTPP 467
>12_02_0478 +
19514509-19514940,19515749-19515820,19515954-19515986,
19516169-19516830,19516905-19517045,19518634-19518830,
19518878-19518965,19518987-19519041,19519501-19519571,
19519709-19519763,19519881-19519896,19520286-19520361,
19521202-19521240,19521312-19521333
Length = 652
Score = 26.2 bits (55), Expect = 7.4
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = -3
Query: 262 SLANMPA*TAGCKVFTRPPSISGALVISETSRTESPAFLSAVAVPPLPTS*RPISDKALP 83
+L+ P TAG VFT PP +S + ++ SPA A V + I DK LP
Sbjct: 108 ALSVAPPPTAG-SVFTVPPGLSPSGLLDSPGLLFSPAMFDAFDVLDM-----FIPDKILP 161
Query: 82 K 80
K
Sbjct: 162 K 162
>05_05_0214 + 23319507-23321540
Length = 677
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 117 VGSGGTATALRNAGLSVLDVSDITKAPEMLGGRVKTLHPAVH 242
+GSG T A NA +VL ++ + LG + + VH
Sbjct: 469 MGSGATWRAKENAAATVLSLASVHSYRRRLGRNPRVVERVVH 510
>05_02_0012 -
5575574-5575849,5575889-5575954,5576103-5576926,
5577333-5577405,5577936-5577983
Length = 428
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 156 LRSSAQSLCHRYRLAEDPFQTKL 88
L+SS+ SLCHR L+ P + L
Sbjct: 77 LKSSSLSLCHRQTLSRPPHHSVL 99
>04_04_1263 -
32207636-32207938,32208020-32208170,32208263-32208500,
32208604-32208814,32208927-32209108,32209196-32209297,
32210002-32211187,32212103-32212499,32212551-32212582,
32212885-32213157,32213307-32213394,32213486-32213723,
32213824-32214034,32214119-32214300,32214378-32214479,
32214801-32216224,32216751-32216822,32217688-32217719,
32218186-32218263,32218425-32218512,32218608-32218845,
32219060-32219162,32219386-32219558,32219644-32219745,
32219825-32220606,32220659-32221012,32224055-32224140,
32224250-32224400,32224534-32224771,32224876-32225119,
32225190-32225368,32225577-32225675,32225835-32227083
Length = 3195
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 42 ALLSVSDKTGLLILGKALSEMGLQLVGSGGTATALRNAGLSVL 170
A L+V++ +GL++ + +G GG L+N G VL
Sbjct: 824 ARLAVTNTSGLVLSDSKGTTANTVTIGGGGATAVLQNTGNFVL 866
>04_04_1249 -
32067644-32067787,32068245-32068346,32068415-32068438,
32068439-32068543,32068625-32068729,32068885-32068966,
32069254-32069456,32069534-32069692,32070045-32070154,
32070264-32070405,32070544-32070690,32070773-32070847,
32070923-32071132,32071223-32071426,32071514-32071633,
32071743-32071852,32072033-32072177,32072266-32072499,
32072611-32072646
Length = 818
Score = 25.8 bits (54), Expect = 9.8
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 90 ALSEMGLQLVGSGGTATALRNAGLS-VLDVSDITKAPEMLGGRVKTL 227
ALS++ + + G RN+ L+ +L VSD+ K LGG KTL
Sbjct: 702 ALSDV-IFAIAKGDDHVPFRNSKLTYLLQVSDLCKWMPCLGGDSKTL 747
>01_01_0467 -
3446243-3446254,3446331-3446420,3446544-3446816,
3446898-3447066,3447579-3447646,3447890-3448074,
3448683-3448806
Length = 306
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 160 SPAFLSAVAVPPLPTS*RPISDKALPKISKPVLSDTLSNA 41
S ++ PP PT P ++ S P++SD+LS A
Sbjct: 251 SYSYFCTKEAPPKPTEASPQLNQVKESESDPLISDSLSTA 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,426,725
Number of Sequences: 37544
Number of extensions: 181081
Number of successful extensions: 526
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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