Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O09
         (354 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47576| Best HMM Match : No HMM Matches (HMM E-Value=.)             149   6e-37
SB_57127| Best HMM Match : MGS (HMM E-Value=0.25)                      50   7e-07
SB_18199| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.8  
SB_55378| Best HMM Match : Connexin50 (HMM E-Value=1.8)                26   7.7  
SB_33383| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.016)         26   7.7  

>SB_47576| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 896

 Score =  149 bits (361), Expect = 6e-37
 Identities = 72/106 (67%), Positives = 84/106 (79%)
 Frame = +3

Query: 33  GKLALLSVSDKTGLLILGKALSEMGLQLVGSGGTATALRNAGLSVLDVSDITKAPEMLGG 212
           G LALLSVS+K GL+   K L ++G +LV SGGTA A+RNAG+ V DVS+IT APEMLGG
Sbjct: 33  GSLALLSVSNKKGLVEFAKQLHDLGFRLVASGGTANAIRNAGIPVRDVSEITGAPEMLGG 92

Query: 213 RVKTLHPAVHAGILARLSNTDQEDMKRQNFDLISVVVCNLYPFVQT 350
           RVKTLHPAVH GILAR+S  D+ DM +Q F+ I VVVCNLYPFV T
Sbjct: 93  RVKTLHPAVHGGILARVSEGDKADMAKQGFEYIRVVVCNLYPFVNT 138


>SB_57127| Best HMM Match : MGS (HMM E-Value=0.25)
          Length = 79

 Score = 49.6 bits (113), Expect = 7e-07
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +3

Query: 249 ILARLSNTDQEDMKRQNFDLISVVVCNLYPFVQT 350
           ILAR+S  D+ DM +Q F+ I VVVCNLYPFV T
Sbjct: 2   ILARVSEGDKADMAKQGFEYIRVVVCNLYPFVNT 35


>SB_18199| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 259

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 57  SDKTGLLILGKALSEMGLQLVGSGGTATALRNAG 158
           +DK   ++L +  +  G  +VG+GG   A+  AG
Sbjct: 85  ADKVDFVVLQRVAAARGTAVVGAGGCGVAVVGAG 118


>SB_55378| Best HMM Match : Connexin50 (HMM E-Value=1.8)
          Length = 455

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 187 VISETSRTESPAFLSAVAVPPLPTS*RPISDKALPKI 77
           ++ E  +  +P     +  PPLP   R ISD   P I
Sbjct: 29  LVEENRKVAAPLRKQGIESPPLPPKPRKISDTNRPNI 65


>SB_33383| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.016)
          Length = 251

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 229 CKVFTRPPSISGALVISETSRTESPAF 149
           CK  T PPS S AL  S   + E P+F
Sbjct: 23  CKSTTPPPSASTALFNSTLPKLEVPSF 49


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,634,028
Number of Sequences: 59808
Number of extensions: 199489
Number of successful extensions: 514
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 548040812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)