Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O08
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 58 5e-09
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 57 1e-08
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 53 2e-07
AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical ... 32 0.40
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 31 0.70
U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 28 6.6
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 58.0 bits (134), Expect = 5e-09
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +2
Query: 5 GWGMYKQFISGTGLSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGE 184
GWG I G+ LS+ + + +P + C + + + LCAG G+
Sbjct: 181 GWG---STIEGSSLSAPTLREIHVPLLSTLFCSSLPNYI----GRIHLPSMLCAGYSYGK 233
Query: 185 -DACRGDSGGPLMYEVGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWI 337
D+C+GDSGGPLM + + G VS+G C +PGVY NV+ WI
Sbjct: 234 IDSCQGDSGGPLMCARDGHWELTGVVSWGIG-CARPGMPGVYGNVHSASTWI 284
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +2
Query: 44 LSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGEDACRGDSGGPLMY 223
++S Q +P + D C R L ++ IT Q+CAG A GDSGGPL+
Sbjct: 178 INSQTLQSTSVPIISDDDCVKTWRFL-SLLSVKITGYQICAGAYLHGTA-PGDSGGPLLI 235
Query: 224 EVGN-TFVMVGSVSYGPK----YCGTRNIPGVYTNVYEYIPWIRSTI 349
N +V +G SYG PGVYT + +Y+PWI+ I
Sbjct: 236 HKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVI 282
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 143 ITKEQLCAGG-KPGEDACRGDSGGPLMYE-VGNTFVMVGSVSYGPKYCGTRNIPGVYTNV 316
+++ CAG + G D+C+GDSGGP FV+ G +S+G C + PG+YT V
Sbjct: 191 MSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDG-CAQKKQPGIYTMV 249
Query: 317 YEYIPWIRSTI 349
Y+ WI + I
Sbjct: 250 APYLSWISAII 260
>AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical
protein F25E5.4 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 173 KPGEDACRGDSGGPLMYEVGNTFVMVGSVSYGPKYC 280
K + C GD GG + + N F M+G + G K C
Sbjct: 227 KQNQGLCSGDFGGSAVSRIDNRFTMLGFFAQGNKNC 262
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -2
Query: 255 DPTITKVLPTSYMRGPPESPLHASSPGLPPAHS 157
DPT K P PP SP+HAS P PP S
Sbjct: 1617 DPTAPKDSPLYSNIRPPTSPIHASVPVPPPRMS 1649
>U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical
protein F13H8.5 protein.
Length = 513
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -2
Query: 282 PQYFGP*LTDPTITKVLPTSYMRGPPESPLHASS---PGLPPAHSCSLVITSASPP 124
PQYF P + P Y + P+ PL P PP +S ++VI A PP
Sbjct: 85 PQYFQP------QQQQQPVQYQQQQPQQPLQYQQQPQPAPPPIYSQTVVIPQAPPP 134
>Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical
protein R07B1.3 protein.
Length = 536
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -2
Query: 315 TFVYTPGMFLVPQYFGP*LTDPTITKVLPTSYMRGPPESPLHASSPGLPP 166
TF+ PG+F + Y G P V P ++ PPE H S P
Sbjct: 378 TFLLPPGIFPLVCYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDP 427
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 188 ACRGDSGGPLMYEVGNTFVMVGSVSY 265
AC GDSG P+ V ++VG+V++
Sbjct: 209 ACMGDSGSPVYCFVNGKRILVGTVAH 234
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 161 CAGGKPGEDACRGDSGGP 214
C G PGED RG++G P
Sbjct: 157 CPQGPPGEDGLRGEAGEP 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,418,666
Number of Sequences: 27780
Number of extensions: 340475
Number of successful extensions: 1198
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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