Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O07
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 243 2e-65
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 153 2e-38
SPAC1142.06 |get3||GET complex ATPase subunit Get3 |Schizosaccha... 30 0.34
SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos... 28 1.0
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 28 1.0
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 28 1.4
SPAC1687.03c |rfc4||DNA replication factor C complex subunit Rfc... 27 2.4
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 27 3.2
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 27 3.2
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 27 3.2
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 26 4.2
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 26 4.2
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 26 4.2
SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces pomb... 26 4.2
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.6
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 7.4
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 7.4
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 25 7.4
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 9.7
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 243 bits (595), Expect = 2e-65
Identities = 109/181 (60%), Positives = 135/181 (74%)
Frame = +1
Query: 118 VPDNAPQHCPGTQSEDAGKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILV 297
VP +AP+HCPG SE+AG ASAC GCPNQ +CAS DP + ++ RL +KHKILV
Sbjct: 7 VPLDAPEHCPGPSSENAGTASACEGCPNQQICASAPRGE-DPDLPLVVERLKEIKHKILV 65
Query: 298 LSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGEQVHNSGSGWS 477
LSGKGGVGKST +S L GL+ +G++D DICGPS PR++GV E+ H S GWS
Sbjct: 66 LSGKGGVGKSTFSSQLAWGLSLEEDK-QIGLMDVDICGPSIPRIMGVEKEEAHQSSKGWS 124
Query: 478 PVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPXGTSD 657
P+YV NL++MSIGFLL S D +VIWRGPKKNG+IKQF+ +V+W LDYL++DTP GTSD
Sbjct: 125 PIYVCPNLAVMSIGFLLPSEDSSVIWRGPKKNGLIKQFIKDVNWENLDYLIVDTPPGTSD 184
Query: 658 E 660
E
Sbjct: 185 E 185
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 153 bits (371), Expect = 2e-38
Identities = 76/138 (55%), Positives = 97/138 (70%), Gaps = 7/138 (5%)
Frame = +1
Query: 268 LSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPY---VNVGILDADICGPSQPRVLGV 438
+ V+H ILVLSGKGGVGKS+VT+ L L Y + GILD D+ GPS PR+ G
Sbjct: 1 MDKVQHVILVLSGKGGVGKSSVTTQLALSLHDSKVYSRPLKTGILDIDLTGPSIPRMFGK 60
Query: 439 RGEQ--VHNSGSGWSPVYV--TENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVD 606
E+ +H S +GW PVY T+ + LMS+GFLL S +D+V+WRGPKK MI+QF+S+V
Sbjct: 61 DAERNRIHQSSAGWVPVYTDETKEIGLMSLGFLLTSKNDSVVWRGPKKAAMIRQFISDVS 120
Query: 607 WGELDYLLIDTPXGTSDE 660
WGELD+L+IDTP GT DE
Sbjct: 121 WGELDFLIIDTPPGTGDE 138
>SPAC1142.06 |get3||GET complex ATPase subunit Get3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 238 DPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLL 345
DP ++N L K + + GKGGVGK+T + L
Sbjct: 4 DPLPGTLENLLEQTSLKWIFVGGKGGVGKTTTSCSL 39
>SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 119 CQIMHLSIALEHKVRTPAKLPHALDARIKIYV 214
C I++ IAL+ R P K+PH D R +YV
Sbjct: 430 CAIVYCCIALK---RFPWKVPHTSDKRFNLYV 458
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 391 RSQHLHMEFVQRVHVQARKLLYSSPLPPSRKVQVFC 284
+S + +FV+RV ++ R L YS+ + P ++VFC
Sbjct: 587 KSYRFNQQFVERVPLKYRSLTYSNKIEP---MKVFC 619
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 435 TEYTGLARTTYICIQDPNIYIWSSCSESMSKQGSYCTL 322
T+ + Y+CIQ Y W + SE M SYC+L
Sbjct: 740 TDMDSMDNCVYLCIQKFESYGWGASSE-MECYFSYCSL 776
>SPAC1687.03c |rfc4||DNA replication factor C complex subunit
Rfc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 274 NVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILD 396
N+ H LV+SG G+GK+T L H L P G+L+
Sbjct: 53 NMPH--LVISGMPGIGKTTSILCLAHALLG--PAYKEGVLE 89
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -2
Query: 625 GSPAPPSPLRLRTALSYHFSWDPSI*PRRLHCPAETRSTLAIDSPLHIQETSPSQ 461
GSP PP+ ++ +LS H S P R PA + + + + P E P +
Sbjct: 455 GSPDPPAAPSIQNSLSVHESEMPPHVTRDYTQPAASATPVPKEKPSEKSEKPPKK 509
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 26.6 bits (56), Expect = 3.2
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +1
Query: 241 PAIEIIKNRLSNVKH-KILVLSGKGGVGKST--VTSLLGHGLAA 363
PA E + + ++H +++V+SG+ G GKST V +L H L++
Sbjct: 578 PAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSS 621
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 208 LCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGL 357
+C+ G PD ++ + N L+N+ K ++ G +T+ +LL G+
Sbjct: 224 ICSIGAMISPDDDLKNLSNTLANIAEKWVLDEGLNSPDITTLQTLLVLGI 273
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 295 VLSGKGGVGKSTVTSLLGHGLAARTPYVNVG 387
+L G G GKST+ LL A+ +++VG
Sbjct: 34 LLVGANGAGKSTLLKLLSGKSLAKAGHISVG 64
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/66 (19%), Positives = 27/66 (40%)
Frame = -1
Query: 401 SASKIPTFTYGVRAASPCPSKEVTVLFPTPPFPESTSILCFTFDKRFFIISIAGSGREAS 222
++ +P ++ P + +++ P P + F ++RFF + +AG E
Sbjct: 47 ASQALPQISFSWTLIDQPPDGSLFLVWQAPTLPSPPDGMHFMSNERFFNMDVAGKVLEIH 106
Query: 221 PEAHRF 204
H F
Sbjct: 107 EAKHGF 112
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 298 LSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGV 438
L+G+ G+GKST+ L A ++ + ++ ++ G P + V
Sbjct: 213 LTGRNGIGKSTLLRALSRREIAIPTHITILHVEQEMTGDDTPALQSV 259
>SPBPB2B2.12c |||UDP-glucose 4-epimerase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 289 ILVLSGKGGVGKSTVTSLLGHG 354
ILV G G +G TV L+ HG
Sbjct: 8 ILVTGGAGYIGSHTVIELINHG 29
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 344 SKEVT-VLFPTPPFPESTSILCFTFDKR 264
S+++T V TPPFPES + F+ +++
Sbjct: 116 SEDITAVSLSTPPFPESIDVARFSSEEK 143
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 7.4
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -2
Query: 535 HCPAETRSTLAIDSPLHIQETSPSQSYVLAPRGHRVHGAGSDHIYLHPRS-QHLHMEFVQ 359
H RST ++ L+ S ++ + R H+ H A S + S L ++ +
Sbjct: 425 HSHTTPRSTSKHENNLNNITNSAKNEHIRSQRQHKTHAAPSKELTKESLSNDQLSVKEKR 484
Query: 358 RVHVQARKLLYSSPLPPSRKV 296
R H +A L+ + P + K+
Sbjct: 485 RHHKKAPTLIQNLNSPRTPKI 505
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 262 NRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVG 387
N L N +++ ++++G+ G GK+ T + LAA VG
Sbjct: 156 NLLENKENQSILVTGESGAGKTENTKRIIQYLAAIASSTTVG 197
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 256 IKNRLSNVKHKILVLSGKGGVGKSTVTSLL 345
+ ++L +K K +V+ G GVGKST+ L
Sbjct: 9 VASKLVTLKLKPVVVFGPSGVGKSTLLKRL 38
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 536 ALPSRNPIDISDRFSVTYTGDQPEP 462
A P+RNP + S+ G QP P
Sbjct: 491 ATPTRNPFAFENTVSIHMDGRQPSP 515
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,089,441
Number of Sequences: 5004
Number of extensions: 72067
Number of successful extensions: 276
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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