Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O07
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 7e-25
SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 7e-22
SB_30493| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_31919| Best HMM Match : ArgK (HMM E-Value=7.6e-15) 32 0.36
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 31 0.84
SB_40275| Best HMM Match : Cadherin (HMM E-Value=0) 31 0.84
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 31 1.1
SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17) 30 1.5
SB_38113| Best HMM Match : HORMA (HMM E-Value=0) 30 1.5
SB_46958| Best HMM Match : DUF1349 (HMM E-Value=5.2) 30 1.9
SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59) 30 1.9
SB_20640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_23100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08) 29 3.4
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 29 3.4
SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30) 29 4.5
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 29 4.5
SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 5.9
SB_39437| Best HMM Match : TLP-20 (HMM E-Value=1.5) 28 7.8
SB_25441| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_52023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 99.1 bits (236), Expect(2) = 7e-25
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +1
Query: 484 YVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPXGTSDE 660
YV +NL +MS+GFLL DAVIWRGPKKNG+IKQFL +VDWG+ D+L++DTP GTSDE
Sbjct: 270 YVEDNLGVMSVGFLLAKPTDAVIWRGPKKNGLIKQFLRDVDWGDADFLVVDTPPGTSDE 328
Score = 32.7 bits (71), Expect(2) = 7e-25
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1
Query: 298 LSGKGGVGKSTVTSLLGHGLAA 363
L +GGVGKST T+ L HGLAA
Sbjct: 243 LQTQGGVGKSTFTAHLAHGLAA 264
>SB_52096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 997
Score = 101 bits (241), Expect = 7e-22
Identities = 46/73 (63%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Frame = +1
Query: 448 QVHNSGSGWSPVYV--TENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELD 621
Q+ + W PVY + L +MSIGFLL S +DAV+WRGPKKN MIKQFLS+V WG++D
Sbjct: 146 QLAGIAARWVPVYTGPDQRLGVMSIGFLLHSKEDAVVWRGPKKNAMIKQFLSDVCWGDID 205
Query: 622 YLLIDTPXGTSDE 660
YL+IDTP GTSDE
Sbjct: 206 YLIIDTPPGTSDE 218
>SB_30493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +1
Query: 487 VTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPXGTSD 657
V + MS+GFL+ ++WRG I++ L +V WG LD LLID P GT D
Sbjct: 92 VNFGMPCMSMGFLVDDKAP-IVWRGLMVMSAIEKLLRQVAWGGLDILLIDMPPGTGD 147
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 268 LSNVKHKILVLSGKGGVGKST 330
++ VK ILV SGKGGVGKST
Sbjct: 62 IAGVKQVILVASGKGGVGKST 82
>SB_31919| Best HMM Match : ArgK (HMM E-Value=7.6e-15)
Length = 415
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 244 AIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQP 423
A++ I + N K +L ++G GG GKS++ L P +G++ D PS+
Sbjct: 70 ALDTIHKKNKNSKTPVLGITGTGGAGKSSLVDELVRRFLIDFPEKTIGLISVD---PSKR 126
Query: 424 RVLG-VRGEQVHNSGSGWSPVYV 489
+ G + G+++ + VY+
Sbjct: 127 KTGGALLGDRIRMNAINNERVYM 149
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 238 DPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPS 417
D A+ ++ + KIL LSG +G +T+ ++L TP +G LD CG
Sbjct: 838 DSALSLVTLIQESALLKILNLSGNPSLGNTTLHAIL--NTLMDTPLSQLGTLDLSSCGVR 895
Query: 418 QP 423
P
Sbjct: 896 SP 897
>SB_40275| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1747
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 472 WSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGM---IKQFLSEV 603
W P +T +LS + F+ +AD ++++GP++ G +K F++ V
Sbjct: 1048 WLPKLMTYSLSDLEFEFMTKTADGLLVYQGPEREGANNGLKDFIAVV 1094
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -1
Query: 542 SSALPS-RNPIDISDRFSVTYTGDQPE-PELCTC---SPRTPSTRGWLGPHISASKIPTF 378
++ LPS + P + + QP P+L T S + P+T + ++K PT
Sbjct: 242 TTTLPSTKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQPTT 301
Query: 377 TYGVRAASPCPSKEVTVLFPT--PPFPESTSIL 285
T A P PS + T + PT P PE T L
Sbjct: 302 TQQTTATLPTPSTKPTTVSPTTRQPPPEPTEPL 334
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 121 PDNAPQHCPGTQSEDAGKASACAGCPNQNLCASGEASRP 237
P PQ+CP + A KA AC C +GEA +P
Sbjct: 312 PSQLPQNCPAGEEVAASKA-ACQPCAAGEYSNTGEACQP 349
>SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17)
Length = 1828
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 189 WMPESKSMC-LWRSLASRSSYRNNKESLIKCETQNTCTFREGGSGEEYSNFLAWT-WT 356
W E S+ LW + RS+ + + ++ Q C +++GG Y + L WT WT
Sbjct: 416 WKTELLSLADLWEKIV-RSAQSKMRHTFLRSIHQRDCPYKQGG---PYPSLLVWTVWT 469
>SB_38113| Best HMM Match : HORMA (HMM E-Value=0)
Length = 345
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +1
Query: 145 PGTQSEDAGKASACAG---CPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGG 315
P +AGK S C C + N C + A ++ + + N ++L SG+GG
Sbjct: 4 PNNAESEAGKPSQCTSHIICGSHNRCMASRAVHRYRSL-VEPYWIDNNSSRLLYHSGRGG 62
Query: 316 VGKSTVTSLLGHGLAARTPY 375
+ + V +L G R Y
Sbjct: 63 LVQGEVHALKNGGNQVRQRY 82
>SB_46958| Best HMM Match : DUF1349 (HMM E-Value=5.2)
Length = 248
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 189 WMPESKSMC-LWRSLASRSSYRNNKESLIKCETQNTCTFREGGSGEEYSNFLAWT-WT 356
W E S+ LW + RS+ + + ++ Q C +++GG Y + L WT WT
Sbjct: 61 WKTELISLADLWEKIV-RSAQSKMRHTFLRSIHQRDCPYKQGG---PYPSLLVWTVWT 114
>SB_11846| Best HMM Match : Collagen (HMM E-Value=0.59)
Length = 487
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 147 WNTK*GRRQSFRMRWMPESKSMCLWRSLASRSSYRNNKES 266
WN K R+ +W KS+ W S S Y+ N+ +
Sbjct: 435 WNAKKSEREKLANQWNKAKKSLAYWVSKTSFFEYKLNRNA 474
>SB_20640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 398 ASKIPTFTYGVRAASPCPSKEVTVLFPTPPFPESTSILCFTF 273
+ P+ Y V PC S V+ FP + ST+I C T+
Sbjct: 59 SKNFPSEVYTVSTNFPCESYTVSTKFPNKIYKVSTNIPCETY 100
>SB_23100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 247 IEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADIC 408
++ + +S+ H ++ V+SG G GKS L H L + + G LD DIC
Sbjct: 84 VKQVLREMSDTSHPQVFVMSGCNGSGKSW----LSHALVRQIMEESEGGLDTDIC 134
>SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08)
Length = 349
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 464 PELCTCSPRTPSTR--GWLGPHISASKIPTFTYGVRAASPCPS 342
P L T PR ++ +GP +SAS IP T +ASP P+
Sbjct: 284 PILATIGPRLSASPIPATIGPPLSASPIPATTAPPLSASPIPA 326
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 268 LSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICG 411
L K + +V+SG+ G GK+ T L+ H L A + ++ I G
Sbjct: 227 LKEKKSQCIVISGESGSGKTESTKLIVHHLTALSRKTQASDVEKTILG 274
>SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30)
Length = 351
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 520 FLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPXGT 651
+++G + D +W ++NG +K+F D + Y + P T
Sbjct: 285 YMIGYSLDGSVWSVYQENGAVKEFPGNTDRSSIVYNRLSPPVAT 328
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -1
Query: 539 SALPSRNPIDISDRFSVTYTGDQPEPELCTCSPRTPSTRGWLGPHISASKIPTFTYGVRA 360
S L ++P D S T D P+ E SP+ R W I S P + V
Sbjct: 240 SQLSFQDPAPADDTASATE--DVPQEEPTPESPKEEKPRTWAAMVIQPSPTPAGSAPVVK 297
Query: 359 ASPCPSKEVTV--LFPTPP 309
+P P+++ + + TPP
Sbjct: 298 PAPKPAQQTHIGQMVQTPP 316
>SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1429
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 283 HKILVLSGKGGVGKSTVTSLLGHGLAARTP 372
H+++V+SG+ G GK+ T L LA P
Sbjct: 63 HQVIVISGESGAGKTESTKQLVQYLATANP 92
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +1
Query: 115 GVPDNAPQHCP-GTQS--EDAGKASACAGCPNQNLCASGEAS 231
G P CP GT + D A+ C CP + C GEAS
Sbjct: 637 GTPSPTKFPCPPGTYTVRSDLYDAAQCTVCPERYYCLGGEAS 678
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 453 YLLPADTEYTGLARTTYICIQDPNIYIWSSCSESMSKQGSYCTLPHS 313
Y A+ E++ TT+IC+ P + W+ S+ G Y +L +S
Sbjct: 75 YWRKANKEHSVHQMTTWICLDAPLHHGWAEMLSSVLDNGGYLSLLNS 121
>SB_39437| Best HMM Match : TLP-20 (HMM E-Value=1.5)
Length = 424
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 199 NQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGV 318
N++ C+ + + AIEI+KN V+H +++ +G V
Sbjct: 223 NKHTCSIIPCNTTERAIEILKNPTFRVRHGVIINTGVNDV 262
>SB_25441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 289 ILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADI 405
++ GK GK T L LAAR VN+G D ++
Sbjct: 281 VVQFCGKSLTGKPASTKKLSEQLAAREALVNLGFSDPEL 319
>SB_52023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 289 ILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADI 405
++ GK GK T L LAAR VN+G D ++
Sbjct: 6 VVQFCGKSLTGKPASTKKLSEQLAAREALVNLGFSDPEL 44
>SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 106 RMSGVPDNAPQHCPGTQSEDAGKASACAGCP 198
R+ PD P+ T ED+ + CAGCP
Sbjct: 1216 RVEADPDYLPRKKDFTVDEDSFRMKFCAGCP 1246
>SB_2333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 253 IIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVL 432
I K R S++ V SG+G +T TS + RT + I ADI P++PR L
Sbjct: 324 INKRRSSSMDEVHSVHSGRGTPDSNTSTSTALNTPENRTLIKRMLIKCADIANPARPRYL 383
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,947,945
Number of Sequences: 59808
Number of extensions: 588036
Number of successful extensions: 1740
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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