Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O07
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical pr... 260 8e-70
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 32 0.32
U23517-5|AAB93339.2| 425|Caenorhabditis elegans Serpentine rece... 32 0.42
AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical ... 31 0.96
Z81540-12|CAB04396.2| 149|Caenorhabditis elegans Hypothetical p... 29 2.9
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 29 2.9
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 29 3.9
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF036688-1|AAB88316.1| 225|Caenorhabditis elegans Hypothetical ... 29 3.9
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical p... 28 5.1
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 5.1
Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical pr... 28 6.8
DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein. 28 6.8
DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-couple... 28 6.8
AF026211-1|AAB71293.2| 600|Caenorhabditis elegans Sodium:neurot... 28 6.8
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 9.0
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 9.0
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 9.0
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 9.0
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 9.0
U39667-10|AAC69005.1| 119|Caenorhabditis elegans Hypothetical p... 27 9.0
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 9.0
>Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical
protein F10G8.6 protein.
Length = 313
Score = 260 bits (636), Expect = 8e-70
Identities = 121/184 (65%), Positives = 141/184 (76%)
Frame = +1
Query: 109 MSGVPDNAPQHCPGTQSEDAGKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHK 288
MS VPD+A CPGT S AGKAS CAGCPNQ CA+G+ PD + I++R S +KHK
Sbjct: 1 MSDVPDDANAGCPGTGSAGAGKASGCAGCPNQGSCATGQGPPPDADVPKIQDRFSRIKHK 60
Query: 289 ILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGEQVHNSGS 468
IL+LSGKGGVGKST+TS L LA+ P V ILD DICGPSQPR++GV E+VHNS
Sbjct: 61 ILILSGKGGVGKSTLTSNLARALAS-DPSKQVAILDVDICGPSQPRMMGVEDEEVHNSAD 119
Query: 469 GWSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPXG 648
GW+PV + NL+LMSI FLLG +DAVIWRG +KNGMIKQFL +VDWGE+DYLLIDTP G
Sbjct: 120 GWTPVGIQPNLTLMSIAFLLGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLLIDTPPG 179
Query: 649 TSDE 660
TSDE
Sbjct: 180 TSDE 183
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 464 PELCTCSPRTPSTRGWLGPHISASKIPTFTYGVRAASPCPSKE-VTVLFPTPPFPESTS 291
P T +P P+T+ P A PT V +P P VT P PP PE+T+
Sbjct: 184 PPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTT 242
>U23517-5|AAB93339.2| 425|Caenorhabditis elegans Serpentine
receptor, class o (opsin)protein 1 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -1
Query: 572 FFLGPLHMTASSALPSRNPIDISDRFSVTYTGDQPEPELCTCSPRTPSTRGWLGPHISAS 393
FFL P+ + +S + +D + P+PE+CT +P+ + LG + S
Sbjct: 237 FFLIPVCIASSLYYSIIDHVDSQNASESQLENGIPKPEVCTWAPKNHVGKVGLG-CLLVS 295
Query: 392 KIPTFTYGVRAASPCPS 342
+P F Y + +P S
Sbjct: 296 VVPFFAYSIVCLNPMKS 312
>AF016418-9|AAK18904.1| 186|Caenorhabditis elegans Hypothetical
protein C49G7.11 protein.
Length = 186
Score = 30.7 bits (66), Expect = 0.96
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 211 CASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGI 390
CA G PD A++ +KN+ + I+++ G G K ++G L +T + G+
Sbjct: 47 CAKGARIVPDVALKDVKNKTFD----IIIIPGGPGCSKLAECPVIGELL--KTQVKSGGL 100
Query: 391 LDADICGPSQPRVLGVRGEQV 453
+ A GP+ G+ E+V
Sbjct: 101 IGAICAGPTVLLAHGIVAERV 121
>Z81540-12|CAB04396.2| 149|Caenorhabditis elegans Hypothetical
protein F46B3.15 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +3
Query: 255 NKESLIKCETQNTCTFREGGSG---EEYSNFLAWTWTRCTN-SICKCWDLGCRYMWSEPA 422
N + IKC+ CT + G G + +T C S C D + + P
Sbjct: 54 NSCTTIKCQAGYQCTIKNGKGGCYPVSNKSLDLCVFTTCPKMSSCIVVDGKAKCVPRSP- 112
Query: 423 PCT--RCPRGAST*LWLGLVSCI 485
PCT +CP+G L GL +C+
Sbjct: 113 PCTIKQCPKGQKCGLRNGLSTCV 135
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 434 PSTRGWLGPHISASKIPTFTYGVRAASPCPSKEVTVLFPTPP 309
P+T G G + S PT G+ +S P+ T F PP
Sbjct: 126 PATGGLFGAKSTTSAAPTLGGGLFGSSTAPAAAATTSFGAPP 167
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical protein
C47A10.1 protein.
Length = 1294
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 241 PAIEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLL 345
PA+ I++ +VK + L L G G GKSTV SLL
Sbjct: 1043 PAVPILQGLNVHVKPGQTLALVGPSGCGKSTVISLL 1078
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 241 PAIEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLL 345
PA+ I++ +VK + L L G G GKSTV SLL
Sbjct: 1043 PAVPILQGLNVHVKPGQTLALVGPSGCGKSTVISLL 1078
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 208 LCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVN 381
L + GE R + + ++ K+L+LSG G+GKST+ ++ T VN
Sbjct: 307 LASLGEKERE--VLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVN 362
>AF036688-1|AAB88316.1| 225|Caenorhabditis elegans Hypothetical
protein C24D10.5 protein.
Length = 225
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -3
Query: 354 SMSKQGSYCTLPHSPLPGKYKYFVFHI**AILYYFYSW 241
S S +C+ P+ + +FVF+ A++Y+ + W
Sbjct: 94 SFSGMSYFCSYQRYPISALFSFFVFNATSAMIYFVFVW 131
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 28.3 bits (60), Expect = 5.1
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1
Query: 1 QRSGVFLELWLRQIKLVYKNR*QETSIAHIRAY--FIRMSGVPDNAPQHCPGTQ--SEDA 168
Q+ + ++++L I L Y + ++I+++ + I +G+ N + P T + D
Sbjct: 934 QKEVIPMDMYLSLITLSYTSNMAGSAISYMPDFRKAIHSAGLIFNLFTY-PATMPFNSDT 992
Query: 169 GKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLL 345
G S G N RPD + N L K L + G G GKST+ SLL
Sbjct: 993 GSRSITKGEVNGENVKFHYHQRPDYTVLDSVN-LKVEAGKTLAIVGPSGSGKSTIISLL 1050
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 28.3 bits (60), Expect = 5.1
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1
Query: 1 QRSGVFLELWLRQIKLVYKNR*QETSIAHIRAY--FIRMSGVPDNAPQHCPGTQ--SEDA 168
Q+ + ++++L I L Y + ++I+++ + I +G+ N + P T + D
Sbjct: 934 QKEVIPMDMYLSLITLSYTSNMAGSAISYMPDFRKAIHSAGLIFNLFTY-PATMPFNSDT 992
Query: 169 GKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLL 345
G S G N RPD + N L K L + G G GKST+ SLL
Sbjct: 993 GSRSITKGEVNGENVKFHYHQRPDYTVLDSVN-LKVEAGKTLAIVGPSGSGKSTIISLL 1050
>Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical
protein ZK637.5 protein.
Length = 342
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 256 IKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLA 360
IKN L K + + GKGGVGK+T + L L+
Sbjct: 9 IKNILEQKTLKWIFVGGKGGVGKTTCSCSLAAQLS 43
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = -2
Query: 628 VGSPAPPSPLRLRTALSYHFSWDPSI*PRRLHCPAETRSTLAIDSPLHIQETS 470
VG PAPPSP+ LR A S S P I P H A +R + S L I + S
Sbjct: 52 VGGPAPPSPV-LRRAPSGPISPSP-ISPVSQHSRASSRHDIDNTSLLSILKLS 102
>Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 55 KNR*QETSIAHIRAYFIRMSGVPDNAPQHCPGTQSEDAGKASACAGCP 198
KNR E S A F + +P ++ QH PGT S +S+ A P
Sbjct: 539 KNRGNEPSEKF--AAFTGFTPMPSSSSQHQPGTSSSGPSTSSSIASTP 584
>Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 55 KNR*QETSIAHIRAYFIRMSGVPDNAPQHCPGTQSEDAGKASACAGCP 198
KNR E S A F + +P ++ QH PGT S +S+ A P
Sbjct: 539 KNRGNEPSEKF--AAFTGFTPMPSSSSQHQPGTSSSGPSTSSSIASTP 584
>DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein.
Length = 600
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 477 SCICNGESIANVDRVSAGQCRRRGHMEGSQEKWYDKAVLKRSG 605
+C+ E+ + R+ A GH + S E++++K VL +G
Sbjct: 158 TCVTGKENFTELARIKALVASAGGHTQTSVEQFWEKRVLHDTG 200
>DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-coupled
betaine transporterprotein protein.
Length = 600
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 477 SCICNGESIANVDRVSAGQCRRRGHMEGSQEKWYDKAVLKRSG 605
+C+ E+ + R+ A GH + S E++++K VL +G
Sbjct: 158 TCVTGKENFTELARIKALVASAGGHTQTSVEQFWEKRVLHDTG 200
>AF026211-1|AAB71293.2| 600|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 3
protein.
Length = 600
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 477 SCICNGESIANVDRVSAGQCRRRGHMEGSQEKWYDKAVLKRSG 605
+C+ E+ + R+ A GH + S E++++K VL +G
Sbjct: 158 TCVTGKENFTELARIKALVASAGGHTQTSVEQFWEKRVLHDTG 200
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1250 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1306
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1307 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1340
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1284 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1341 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1374
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1221 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1277
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1278 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1311
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1355 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1411
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1412 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1445
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 434 PSTRGWLGPHISASKIPTFTYGVRAASPCPSKEVTVLFPTPPFPEST 294
P +G++GP A PTF V P P + T P P P +T
Sbjct: 740 PPPQGYVGPLPPAPPPPTFR--VAPQVPLPVVQTTQTAPKPTLPPTT 784
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1250 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1306
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1307 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1340
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1284 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1341 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1374
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1221 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1277
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1278 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1311
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1355 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1411
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1412 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1445
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical protein
F45E10.1e protein.
Length = 1234
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 935 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 991
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 992 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1025
>U39667-10|AAC69005.1| 119|Caenorhabditis elegans Hypothetical
protein C18A11.1 protein.
Length = 119
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 201 SKSMCLWRSLASRSSYRNNKESLIKCETQNTCTFREGGSGEEYSNFL 341
S +C W + + ++R++ E + TF++G + E NFL
Sbjct: 58 SGDLCAWWACDMKRNFRSHPEEFFNVKIDIGETFKKGFTVHELDNFL 104
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
++++K+ L+ + LVL+G G+GKS + L ++ RT I++ I ++
Sbjct: 1284 LQLVKSILTERR---LVLAGATGIGKSKLAKTLAAYVSIRTNQSEDSIVNISIPENNKEE 1340
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLL 528
+L V S S + + +N+ I F++
Sbjct: 1341 LLQVERRLEKILRSKESCIVILDNIPKNRIAFVV 1374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,564,452
Number of Sequences: 27780
Number of extensions: 433786
Number of successful extensions: 1541
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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