Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O07
(662 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.85
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 24 1.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.0
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 3.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.5
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.0
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 7.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 7.9
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 462 WLGLVSCICNGESIANV-DRVSAGQCRRRG 548
W + C+ ES R +AG CR+RG
Sbjct: 426 WRQFLYCLAGDESFRKRRQREAAGNCRKRG 455
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.2 bits (50), Expect = 1.1
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +1
Query: 241 PAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQ 420
P I+IIK + KH I++ G + +++L G L T + V D+ G +
Sbjct: 258 PNIDIIKVQYELAKHGIVIEELGGEIQCVKISALKGINLRELTEAIIVQAELMDLKGDLE 317
Query: 421 PRVLGVRGEQVHNSGSG 471
V GV + ++ G G
Sbjct: 318 GLVEGVIIDCSNHIGRG 334
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/45 (26%), Positives = 17/45 (37%)
Frame = -2
Query: 454 VLAPRGHRVHGAGSDHIYLHPRSQHLHMEFVQRVHVQARKLLYSS 320
V + G H G H ++H H H H + L +SS
Sbjct: 408 VYSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPLAHSS 452
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 88 YVLLKFLVIGFYKLILFVLTRVLKTLHCV 2
+ LL L++GF LIL L+ L CV
Sbjct: 20 FSLLSVLLVGFLFLILIFLSVAGNILVCV 48
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 354 SMSKQGSYCTLPHSPLPGKYK 292
S+ + GSY +PHS L K K
Sbjct: 1061 SVHRAGSYYGVPHSTLEYKVK 1081
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 550 IWRGPKKNGMIKQFLSEVDWGELDYLLI 633
IW+G K G + F S + L LLI
Sbjct: 224 IWKGVKWTGKVVYFTSLFPYALLTILLI 251
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 411 TTYICIQDPNIYIWSSCSESMSKQ 340
++ +CI IYIW + S ++S++
Sbjct: 538 SSMLCIPGYMIYIWFTTSGTISEK 561
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 550 IWRGPKKNGMIKQFLSEVDWGELDYLLI 633
IW+G K G + F S + L LLI
Sbjct: 277 IWKGVKWTGKVVYFTSLFPYALLTILLI 304
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 411 TTYICIQDPNIYIWSSCSESMSKQ 340
++ +CI IYIW + S ++S++
Sbjct: 591 SSMLCIPGYMIYIWFTTSGTISEK 614
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +1
Query: 517 GFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTP 642
GF+ VIWR P +L + +L +L++ P
Sbjct: 47 GFVGNIITCIVIWRNPSMQTPTNYYLFNLAVSDLLFLILGLP 88
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +3
Query: 288 NTCTFREGGSGEEYSNFLAWTWTRCTN 368
N T + G G + + WTW + N
Sbjct: 89 NVITNKTGNGGPLLAPYPDWTWAKNEN 115
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 526 LGSADDAVIWRGPK 567
L S+DD ++RGPK
Sbjct: 111 LESSDDTSLFRGPK 124
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,000
Number of Sequences: 438
Number of extensions: 5420
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -