Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O07
(662 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g50960.1 68418.m06320 nucleotide-binding family protein simil... 244 4e-65
At4g19540.1 68417.m02874 expressed protein 90 1e-18
At3g24430.1 68416.m03066 expressed protein contains Pfam profile... 86 2e-17
At1g12280.1 68414.m01420 disease resistance protein (CC-NBS-LRR ... 34 0.097
At5g24020.1 68418.m02822 septum site-determining protein (MIND) ... 33 0.17
At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR ... 32 0.30
At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /... 32 0.30
At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /... 32 0.30
At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /... 32 0.30
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 31 0.52
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 31 0.90
At3g54950.1 68416.m06092 patatin-related low similarity to patat... 31 0.90
At1g01910.2 68414.m00109 anion-transporting ATPase, putative sim... 31 0.90
At1g01910.1 68414.m00108 anion-transporting ATPase, putative sim... 31 0.90
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 30 1.6
At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR ... 30 1.6
At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR ... 30 1.6
At5g27710.1 68418.m03324 expressed protein 30 1.6
At3g10350.1 68416.m01241 anion-transporting ATPase family protei... 30 1.6
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 29 3.6
At2g16790.1 68415.m01925 shikimate kinase family protein similar... 29 3.6
At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related conta... 28 4.8
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 28 4.8
At3g16300.1 68416.m02057 integral membrane family protein contai... 28 4.8
At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquino... 28 4.8
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 28 4.8
At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein, pu... 28 4.8
At5g59120.1 68418.m07409 subtilase family protein contains simil... 28 6.4
At4g31530.1 68417.m04477 expressed protein 28 6.4
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 28 6.4
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 28 6.4
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 28 6.4
At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR... 28 6.4
At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein, pu... 28 6.4
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 27 8.4
At3g54540.1 68416.m06035 ABC transporter family protein similar ... 27 8.4
At3g24255.1 68416.m03045 expressed protein 27 8.4
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 27 8.4
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 27 8.4
At2g04040.1 68415.m00385 MATE efflux family protein contains Pfa... 27 8.4
At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR ... 27 8.4
>At5g50960.1 68418.m06320 nucleotide-binding family protein similar
to Nucleotide-binding protein 1 (NBP 1) (SP:Q9R060) [Mus
musculus]; contains Pfam PF00991 : ParA family ATPase
Length = 350
Score = 244 bits (597), Expect = 4e-65
Identities = 108/181 (59%), Positives = 139/181 (76%)
Frame = +1
Query: 118 VPDNAPQHCPGTQSEDAGKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILV 297
+P++A +HCPG QSE AGK+ +CAGCPNQ CA+ PDP + I R+S VKHKILV
Sbjct: 6 IPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKG-PDPDLVAIAERMSTVKHKILV 64
Query: 298 LSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGEQVHNSGSGWS 477
LSGKGGVGKST ++ L LA VG++D DICGPS P++LG+ G+++H S GWS
Sbjct: 65 LSGKGGVGKSTFSAQLSFALAGMDH--QVGLMDIDICGPSIPKMLGLEGQEIHQSNLGWS 122
Query: 478 PVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYLLIDTPXGTSD 657
PVYV +NL +MSIGF+L ++D+AVIWRGP+KNG+IKQFL +V WGE+DYL++D P GTSD
Sbjct: 123 PVYVEDNLGVMSIGFMLPNSDEAVIWRGPRKNGLIKQFLKDVYWGEIDYLVVDAPPGTSD 182
Query: 658 E 660
E
Sbjct: 183 E 183
>At4g19540.1 68417.m02874 expressed protein
Length = 313
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/131 (38%), Positives = 71/131 (54%)
Frame = +1
Query: 265 RLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRG 444
RL VK I V SGKGGVGKS+ L LA + + +G+LDAD+ GPS P ++ +
Sbjct: 38 RLHGVKDIIAVASGKGGVGKSSTAVNLAVALANKCE-LKIGLLDADVYGPSVPIMMNINQ 96
Query: 445 EQVHNSGSGWSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDY 624
+ N PV + MS+G L+ D ++WRGP + + VDWG+LD
Sbjct: 97 KPQVNQDMKMIPVE-NYGVKCMSMGLLV-EKDAPLVWRGPMVMSALAKMTKGVDWGDLDI 154
Query: 625 LLIDTPXGTSD 657
L++D P GT D
Sbjct: 155 LVVDMPPGTGD 165
>At3g24430.1 68416.m03066 expressed protein contains Pfam profile
PF01883: Domain of unknown function
Length = 532
Score = 86.2 bits (204), Expect = 2e-17
Identities = 51/130 (39%), Positives = 70/130 (53%)
Frame = +1
Query: 268 LSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPRVLGVRGE 447
LS + + I V S KGGVGKSTV L + LA VGI DAD+ GPS P ++
Sbjct: 172 LSRISNIIAVSSCKGGVGKSTVAVNLAYTLAGMG--ARVGIFDADVYGPSLPTMVNPES- 228
Query: 448 QVHNSGSGWSPVYVTENLSLMSIGFLLGSADDAVIWRGPKKNGMIKQFLSEVDWGELDYL 627
++ + TE + + + F A++ RGP +G+I Q L+ +WGELDYL
Sbjct: 229 RILEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIM-RGPMVSGVINQLLTTTEWGELDYL 287
Query: 628 LIDTPXGTSD 657
+ID P GT D
Sbjct: 288 VIDMPPGTGD 297
>At1g12280.1 68414.m01420 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 894
Score = 33.9 bits (74), Expect = 0.097
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
+E + RL+ +I+ L G GGVGK+T+ + + + + + V I P R
Sbjct: 164 LERVWTRLTEDGDEIVGLYGMGGVGKTTLLTRINNKFSEKCSGFGVVIWVVVSKSPDIHR 223
Query: 427 VLGVRGEQVHNSGSGWSPVYVTENLSLMSIGFLLG 531
+ G G+++ G W V EN + I +LG
Sbjct: 224 IQGDIGKRLDLGGEEWD--NVNENQRALDIYNVLG 256
>At5g24020.1 68418.m02822 septum site-determining protein (MIND)
identical to MinD [Arabidopsis thaliana] GI:6759277;
contains Pfam PF00991 : ParA family ATPase
Length = 326
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +1
Query: 289 ILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADI 405
+++ SGKGGVGK+T T+ +G L AR + +V +DAD+
Sbjct: 61 VVITSGKGGVGKTTTTANVGLSL-ARYGF-SVVAIDADL 97
>At5g63020.1 68418.m07906 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 888
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 238 DPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTS 339
DP +E NRL + IL L G GGVGK+T+ S
Sbjct: 159 DPMLESAWNRLMEDEIGILGLHGMGGVGKTTLLS 192
>At5g05000.3 68418.m00531 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 IEII-KNRLSNVKHKILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 390
+EI+ K + +V +++ GKGGVGK STV S++G AA + + + G+
Sbjct: 25 LEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At5g05000.2 68418.m00530 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 IEII-KNRLSNVKHKILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 390
+EI+ K + +V +++ GKGGVGK STV S++G AA + + + G+
Sbjct: 25 LEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At5g05000.1 68418.m00529 translocate of chloroplast 34 (TOC34) /
GTP-binding protein (OEP34) contains Pfam PF04548: AIG1
family;contains TIGRFAM TIGR00991: GTP-binding protein
and TIGR00231: small GTP-binding protein domain; 99.7%
identical to atToc34 protein (GI:11557975) [Arabidopsis
thaliana]; similar to Chain A, Pea Toc34 - A Novel
Gtpase Of The Chloroplast Protein Translocon
(GI:1865556) [Pisum sativum]; almost identical to
SP:Q38906 Translocase of chloroplast 34; identical to
cDNA GTP-binding protein (OEP34) GI:1151243
Length = 313
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 IEII-KNRLSNVKHKILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 390
+EI+ K + +V +++ GKGGVGK STV S++G AA + + + G+
Sbjct: 25 LEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGL 74
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 289 ILVLSGKGGVGK-STVTSLLGHGLAARTPYVNVGI 390
+LVL GKGGVGK STV SL+G + +P+ G+
Sbjct: 39 VLVL-GKGGVGKSSTVNSLIGEQVVRVSPFQAEGL 72
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 30.7 bits (66), Expect = 0.90
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +1
Query: 238 DPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPS 417
D +E L ++++L + G GGVGK+T+ +L+ + + +V I
Sbjct: 161 DTTLEKTWESLRKDENRMLGIFGMGGVGKTTLLTLINNKFVEVSDDYDVVIWVESSKDAD 220
Query: 418 QPRVLGVRGEQVHNSGSGWS 477
++ GE++H + WS
Sbjct: 221 VGKIQDAIGERLHICDNNWS 240
>At3g54950.1 68416.m06092 patatin-related low similarity to patatin
[GI:169500][Solanum tuberosum]; contains Patatin domain
PF01734
Length = 488
Score = 30.7 bits (66), Expect = 0.90
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 229 SRPDPAIEIIKNRLSNVKHKILVLS----GKGGVGKSTVTSLLGHGLAARTPYVNVGILD 396
S+P+PA ++ + N + KI +LS G G+ + L H L +++ N I D
Sbjct: 78 SKPEPANSVVAGSIKNQRGKICILSIDGGGMRGILPGKALAYLEHALKSKSGDPNARIAD 137
Query: 397 -ADICGPSQPRVLGVRGEQVHNSGSGWSPVYVTEN 498
D+ S + G+ + S G P++ ++
Sbjct: 138 YFDVAAGS--GIGGIYTAMLFGSRDGNRPIFKADD 170
>At1g01910.2 68414.m00109 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 256 IKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAA 363
++N L K + + GKGGVGK+T +S+L LA+
Sbjct: 10 VQNILDQESLKWVFVGGKGGVGKTTCSSILAICLAS 45
>At1g01910.1 68414.m00108 anion-transporting ATPase, putative
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase
Length = 353
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 256 IKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAA 363
++N L K + + GKGGVGK+T +S+L LA+
Sbjct: 10 VQNILDQESLKWVFVGGKGGVGKTTCSSILAICLAS 45
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 622 SPAPPSPL-RLRTALSYHFSWDPSI*PRRLHCPAETRSTLAIDSPLHIQETSPSQSYVLA 446
SPA PSP + + +S+ S P+ P H PA T S +P H +PS S A
Sbjct: 203 SPATPSPSPKSPSPVSHSPSHSPAHTPS--HSPAHTPSHSPAHAPSHSPAHAPSHSPAHA 260
Query: 445 PRGHRVH 425
P H
Sbjct: 261 PSHSPAH 267
>At5g43470.2 68418.m05315 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 250 EIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGH 351
E++ + + N H+++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFH 207
>At5g43470.1 68418.m05314 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein. Closest
Col-0 homolog to RPP8
Length = 908
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 250 EIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGH 351
E++ + + N H+++ ++G GG+GK+T+ + H
Sbjct: 174 ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFH 207
>At5g27710.1 68418.m03324 expressed protein
Length = 380
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 500 RFSVTYTGDQPEPELCTCSPRT 435
+F V + D+P+PE CSPRT
Sbjct: 70 KFLVPFKSDKPKPEFGRCSPRT 91
>At3g10350.1 68416.m01241 anion-transporting ATPase family protein
similar to SP|O43681 Arsenical pump-driving ATPase (EC
3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
(ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
Anion-transporting ATPase; contains non-consensus GA
donor splice site at intron 5
Length = 411
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 235 PDPAIEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLL 345
P I +S K K +L GKGGVGK++ + L
Sbjct: 71 PTETISEFDEMVSGTKRKYYMLGGKGGVGKTSCAASL 107
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 297 TFREGGSGEEYSNFLAWTW 353
T REG +G+E++N W+W
Sbjct: 892 TGREGNNGDEHTNLADWSW 910
>At2g16790.1 68415.m01925 shikimate kinase family protein similar to
thermosensitive glucokinase from Escherichia coli
[SP|P39208] [SP|P46859]; contains Pfam profile PF01202:
shikimate kinase
Length = 189
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 271 SNVKHKILVLSGKGGVGKSTVTSLLGHGLA 360
++V K++ + G G GKST+ +LG L+
Sbjct: 5 NDVTGKVIAIMGVSGAGKSTIGKMLGKALS 34
>At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 738
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 253 IIKNRLSNVKHKILVL-SGKGGVGKSTVTSLLGHGLAART 369
I+ R+ K + VL G G GKST+++LLG L T
Sbjct: 161 ILSCRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITT 200
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +1
Query: 289 ILVLSGKGGVGKS-TVTSLLGHGLAA 363
ILVL GK GVGKS T+ S+LG+ +A+
Sbjct: 858 ILVL-GKAGVGKSATINSILGNQIAS 882
>At3g16300.1 68416.m02057 integral membrane family protein contains
TIGRFAM TIGR01569 : plant integral membrane protein
TIGR01569; contains Pfam PF04535 : Domain of unknown
function (DUF588); At2g38480, At1g45222 and others
share this domain structure; distantly related to
GP|14030504 salicylic acid-induced fragment 1 protein
{Gossypium hirsutum}
Length = 212
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = -2
Query: 514 STLAIDSPLHIQETSPSQSYVLAPRGHRVHGAGSDHIYLHPRSQHLHMEFVQRVHVQARK 335
ST+A+ + +ETS + Y + H V IYL S + + ++ + +
Sbjct: 59 STVAVTLMVTARETSMTTLYGFEFQLHAVWSLSDSLIYLVVVSSATVLYSLIQLIISGTR 118
Query: 334 LLYSSPLPPSRKVQVFC 284
L+ SP+ P+R FC
Sbjct: 119 LMRKSPVIPTRTQAWFC 135
>At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquinone
oxidoreductase family protein contains Pfam profile:
PF05187 Electron transfer flavoprotein-ubiquinone
oxidoreductase
Length = 633
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 596 LKNC-FIIPFFLGPLHMTASSALPSRNPIDISDRFSVTYTGD 474
LKN I+P T+SS P +P++ S+RF Y+ D
Sbjct: 22 LKNQRLILPLLPSSKPFTSSSVSPPPSPLNASNRFGYPYSAD 63
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -2
Query: 622 SPAPPSPLRLRTALSYHFSWDPSI*PRRLHCPAETRSTLAIDSPLHIQETSPSQSY 455
SP PP PL+ ALS S P PR + + + PLH + +P +
Sbjct: 273 SPPPPPPLKKTAALSSSASKKPPPAPRGSSSGESSNGQVKL-KPLHWDKVNPDSDH 327
>At1g02530.1 68414.m00204 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1273
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 241 PAIEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLL 345
P I+I ++ ++ K + L G+ G GKSTV SLL
Sbjct: 1040 PGIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLL 1075
>At5g59120.1 68418.m07409 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]; non-consensus AA acceptor site at exon 6
Length = 732
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 271 SNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGIL 393
S VK KILV G GG+ V S+ GL RTP +V +
Sbjct: 382 SRVKGKILVCGGPGGL--KIVESVGAVGLIYRTPKPDVAFI 420
>At4g31530.1 68417.m04477 expressed protein
Length = 324
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 289 ILVLSGKGGVGKSTVTSLLGHGLAAR 366
+LV+ G GGVG+ V SLL + +R
Sbjct: 76 VLVVGGTGGVGQLVVASLLKRNIRSR 101
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 253 IIKNRLSNVKHKILVL-SGKGGVGKSTVTSLLGHGLAART 369
I+ R+ K + VL G G GKST+++LLG L T
Sbjct: 128 ILACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITT 167
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 253 IIKNRLSNVKHKILVL-SGKGGVGKSTVTSLLGHGLAART 369
I+ R+ K + VL G G GKST+++LLG L T
Sbjct: 147 ILACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITT 186
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 157 SEDAGKASACAGCPNQNLCASGEASRPDPAIEIIKNRLSNVKHKILVLSGKGG 315
S + G A CP+ + +G ASR E + N H +V SG GG
Sbjct: 152 SPNTGVLPAGNICPSGRILKTGMASRTSSRTETLCTGTGNYGHGNVVRSGGGG 204
>At1g56520.1 68414.m06499 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 897
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 268 LSNVKHKILVLSGKGGVGKSTVTSLLGHG 354
L N KI+ +SG G+GKST+ + L HG
Sbjct: 202 LKNDGVKIVGISGPAGIGKSTIATAL-HG 229
>At1g02520.1 68414.m00203 multidrug resistance P-glycoprotein,
putative similar to multidrug-resistant protein CjMDR1
GI:14715462 from [Coptis japonica]
Length = 1278
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 229 SRPDPAIEIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLL 345
+RPD I+I ++ ++ K + L G+ G GKSTV SLL
Sbjct: 1043 ARPD--IQIFRDLCLTIRAGKTVALVGESGSGKSTVISLL 1080
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +1
Query: 247 IEIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICGPSQPR 426
+E N + V +L + G GGVGK+T+ S + + + ++ I P+ R
Sbjct: 163 VESTWNSMMEVGVGLLGIYGMGGVGKTTLLSQINNKFRTVSNDFDIAIWVVVSKNPTVKR 222
Query: 427 VLGVRGEQVHNSGSGW 474
+ G+++ GW
Sbjct: 223 IQEDIGKRLDLYNEGW 238
>At3g54540.1 68416.m06035 ABC transporter family protein similar to
ABC50 GI:10863747 from [Rattus norvegicus]
Length = 723
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 250 EIIKNRLSNVKH-KILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILDADICG 411
E++KN + H K L G G+GKST+ LL ++V +++ ++ G
Sbjct: 176 ELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVG 230
>At3g24255.1 68416.m03045 expressed protein
Length = 836
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 397 ADICGPSQPRVLGVRGEQVHNSGSGWS 477
+D+C P LG+R + N GS WS
Sbjct: 209 SDVCTPKDEGGLGIRSLKEANKGSFWS 235
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = -1
Query: 488 TYTGDQPEPELCTCSPRTPST-----RGWLGPHISASKIPTFTYGVRAASPCPSKEVTVL 324
T +G P P + T P PS G P S++ P+ YG +P
Sbjct: 59 TASGPPPAPPVGTMRPGQPSPFVSQIPGSRPPPPSSNSFPSPAYGPPGGAPFQR------ 112
Query: 323 FPTPPFP 303
FP+PPFP
Sbjct: 113 FPSPPFP 119
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 286 KILVLSGKGGVGKSTVTSLLGHGLAARTPYVNVGILD--ADICGPSQPRVLGVRGEQV 453
KI+ LSG GVGK+++ + L + +VG L A+I G Q V + G+ V
Sbjct: 441 KIICLSGPPGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHCQTYVGAMPGKMV 498
>At2g04040.1 68415.m00385 MATE efflux family protein contains Pfam
profile: PF01554 uncharacterized membrane protein family
Length = 476
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Frame = -1
Query: 428 TRGWLGPHISASKIPTFTYGVRAASPCPSK----EVTVL----FPTPPFPESTSILCFTF 273
TRG++ +S F YG+ +A+ + E+ +L P P S +C T
Sbjct: 237 TRGFVSRDFVSSIKQFFQYGIPSAAMICLEWWLFEILILCSGLLPNPKLETSVLSICLTI 296
Query: 272 DKRFFIISIAGSGREASPEAHRF*FGHPAHAEALPASSLCV 150
+ ++IS + ++ ++ G+P A + LC+
Sbjct: 297 ETLHYVISAGVAAAVSTRVSNNLGAGNPQVARVSVLAGLCL 337
>At1g53350.1 68414.m06048 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 906
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 250 EIIKNRLSNVKHKILVLSGKGGVGKSTVTSLLGH 351
E++ + + N +++ +SG GG+GK+T+ + H
Sbjct: 172 ELVDHLVENDSVQVVSVSGMGGIGKTTLARQVFH 205
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,662,009
Number of Sequences: 28952
Number of extensions: 409741
Number of successful extensions: 1444
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1436
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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