Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O06
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 62 3e-10
01_01_1152 + 9170628-9171899 52 6e-07
11_01_0771 + 6453130-6454488 46 4e-05
11_01_0750 - 6315126-6315896,6316371-6316784 45 6e-05
11_01_0767 + 6438648-6438809,6439146-6440000 44 8e-05
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 44 1e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 43 2e-04
11_02_0011 - 7337618-7338496,7338596-7338991 43 3e-04
04_04_0619 + 26652923-26653267,26653440-26654273 41 0.001
11_02_0012 - 7346282-7347136,7347234-7347593 39 0.003
11_02_0014 - 7352619-7352918,7353173-7353418 38 0.007
03_05_0294 + 22855503-22855946,22856346-22856399 32 0.37
09_02_0338 + 7426999-7428322,7428390-7428646 29 2.6
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790... 29 2.6
10_08_1040 + 22503641-22503681,22503838-22504299,22506952-225073... 29 3.4
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 29 4.5
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 28 6.0
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 28 6.0
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984... 28 7.9
03_06_0584 + 34909800-34910261 28 7.9
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Frame = +3
Query: 159 DKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNP 332
DKN+ SPL + + L AGA + +I FLG G +++L + P
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 333 D------YFTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDT-KKAADIINQWAN 488
AN ++V L + + +Y++E + F D ++A IN+W
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 489 EKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKE 623
T G IK + D +D A L N ++F+G W F+A T +
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSD 195
>01_01_1152 + 9170628-9171899
Length = 423
Score = 51.6 bits (118), Expect = 6e-07
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Frame = +3
Query: 162 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGV-ANPYISLSKTFSEMNPDY 338
+N + SPL + L GA ++ E+ FLG+ + + +P L +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 339 FTMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFS-DTKKAADIINQWANEKTRGHIK 512
F ++V L +F +Y + E DF+ ++A + +N + ++ T G I+
Sbjct: 119 FACG--VWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 513 SPISDDTIDPNAAAALFNVIFFQGHWHVPFNASET 617
+ +++D + L N + F+G W +PF+ S T
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSAT 211
>11_01_0771 + 6453130-6454488
Length = 452
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 453 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEK 626
++A IN WA T I + ++ P A L N I+F+G W PFN S+T+ K
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERK 228
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.8 bits (101), Expect = 6e-05
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 11/151 (7%)
Frame = +3
Query: 171 VSSPLGVMMLMLLYKAGAGEGSRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNPDYFT 344
VS+P V + + L GA +R ++ + LG G G A+ S+ + D T
Sbjct: 36 VSAP-AVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDRST 94
Query: 345 -------MANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDTKK-AADIINQWANEKT 497
A ++ +L +F + Y S + DF + + A D IN W + T
Sbjct: 95 SGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDST 154
Query: 498 RGHIKSPISDDTIDPNAAAALFNVIFFQGHW 590
+G + + + TID N L + ++F+G W
Sbjct: 155 KGTVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 405 VRQYQSEVETIDFSDTK-KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQ 581
V Y+ T+DF + +A IN W T+ I I ++ + + N I+F+
Sbjct: 39 VGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFK 98
Query: 582 GHWHVPFNASETKEKD 629
G W PF+ S+T E++
Sbjct: 99 GEWLAPFDKSDTAERE 114
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 429 ETIDFSDTKKAADI---INQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVP 599
E I + KAA++ +N W + T G IK + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEK 259
Query: 600 FNASETKE 623
F+AS+TK+
Sbjct: 260 FDASKTKD 267
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +3
Query: 363 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISDDTIDP 542
+ + D F +++ + V + +N W + T G IK+ + +I+
Sbjct: 433 IAEDFVADHPFLFLIQEDMTGVVLFVGHVAAEVLGQVNSWVDRVTSGLIKNIATPRSINH 492
Query: 543 NAAAALFNVIFFQGHWHVPFNASETKE 623
N L N ++F+G W F+ S+T++
Sbjct: 493 NTKLVLANALYFKGAWAEKFDVSKTED 519
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +3
Query: 162 KNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGN-GDYSGV---ANPYISL-SKTFSEM 326
+NV SPL + + + L AGAG +R ++ LG G G+ A + L S
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGA 94
Query: 327 NPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDF 443
A+ ++V +L + F + V +Y++E ++DF
Sbjct: 95 GGPRVAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +3
Query: 456 KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDSM 635
+ A +N W + T G IK + ++D L N ++F+G W F+AS+TK+ +
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 636 L 638
L
Sbjct: 64 L 64
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 42.7 bits (96), Expect = 3e-04
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Frame = +3
Query: 153 SKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPY-----ISLSKTF 317
S +KN+V SP + + L AGA + E+ LG + + L+
Sbjct: 28 SSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADES 87
Query: 318 SEMNPDYFTMANKIYVGNKYTLDEK---FTITVRQYQSEVETIDFS-DTKKAADIINQWA 485
+ P +++ V + TL+ K Y++ +F K++ IN+W
Sbjct: 88 ASGGP---RVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWV 144
Query: 486 NEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASET 617
++ T I + D ++ + A L N I+F+G W PF S T
Sbjct: 145 SKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSST 188
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Frame = +3
Query: 141 TYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFS 320
T ++ N + SPLG+ + L G + ++ FLG+ + + + +
Sbjct: 13 TKAITEQSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGS---QHIHQLNAASAGLLA 69
Query: 321 EMNP-DYFTMANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADI-INQWANE 491
EM + A I+V L +F T + + ++DF + AA +N++ ++
Sbjct: 70 EMRAWPQLSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQ 129
Query: 492 KTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEK 626
T G + + IS T + L N + F+ W F + +T+ +
Sbjct: 130 ATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRR 174
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 453 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASET 617
K + IN+W ++ T I+ + D ++ A L N I+F+G W PF T
Sbjct: 122 KSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERT 176
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 447 DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASET 617
+ KK+ IN+W ++ T I + D ++ L N I+F+G W PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPREST 138
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 32.3 bits (70), Expect = 0.37
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Frame = +3
Query: 165 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFL---GNGDYSGV---ANPYISL-SKTFSE 323
NV SPL + + + L AGAG +R ++ L G G G+ A + L S
Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSP 104
Query: 324 MNPDYFTMANKIYVGNKYTLDEKF-TITVRQYQSEVETIDFSDTKKAAD 467
A+ +++ + +L + F + V +Y++E ++DF TK D
Sbjct: 105 AGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDF-QTKVLRD 152
>09_02_0338 + 7426999-7428322,7428390-7428646
Length = 526
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 240 HDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTFP 136
H+YLH+ + E + +SRLMV+ +C ++ + P
Sbjct: 379 HNYLHKERNDLERIYNSRLMVQHTRNCVTLPHRNP 413
>03_02_0377 -
7898075-7898605,7900782-7901000,7901079-7901142,
7901226-7901282,7901373-7901471,7901744-7901793,
7902378-7902422,7902967-7903062
Length = 386
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -2
Query: 238 RLPSPAPALYRSISIITPNGEDTTFLSFDDVYVSLRNCKEVLSMASPKAVLLYSWSE 68
R+P P P L+ ++S+I L+F Y + C + + + P+ L W +
Sbjct: 40 RIPLPGPPLFYNVSLIMSRRSRCVLLAFGYAYPAY-ECYKTVELNKPEIEQLIFWCQ 95
>10_08_1040 +
22503641-22503681,22503838-22504299,22506952-22507361,
22507484-22507640,22507718-22507937,22508053-22508106,
22508193-22508272,22508359-22508636,22509193-22509515,
22509590-22509853,22510453-22510860
Length = 898
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 273 NLHCLKTCRSPHDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTF 139
NL+ +C H + RRQL T+ SS + +S PS Y+F
Sbjct: 799 NLNSSSSCGEEHWRMKRRQLETQQDESSYSAKQKSYSYPSTSYSF 843
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 312 FYLS*CTDWQPRYNLHCLKTC 250
+ L CTD+ P+Y HC +C
Sbjct: 296 YLLDGCTDYNPKYKEHCSTSC 316
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 483 ANEKTRGHIKSPISDDTIDPNAAAA 557
A + RG KSP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/85 (20%), Positives = 37/85 (43%)
Frame = -1
Query: 563 EERGSCIRIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNFALVLTDSDREFLI 384
EE G CI R R+NM + + + +C FG A + + F + +F +
Sbjct: 625 EEYGDCISFDTTYRTNRYNMPFAPFVGVIGHGTTCLFGCAFLEA-EFESLWPQMIEKFNL 683
Query: 383 QSIFISDVDFIGHSEVIRIHLRERF 309
Q++ + + ++ + ++ + F
Sbjct: 684 QNVNYLKIMWKNRAQFVPVYFKYDF 708
>08_01_0978 +
9841441-9842169,9842303-9842590,9842768-9843612,
9843941-9844223,9844303-9844416
Length = 752
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 411 QYQSEVETIDFSDTKKA-ADIINQWANEKTRGHIKSPISDDTID-PNAA 551
++ E E + S+T++ ADI QWA R +K SD+T+ PN A
Sbjct: 188 EWDKEDEAVAESNTQQVLADIPVQWARNWARARVKKN-SDETLSFPNPA 235
>03_06_0584 + 34909800-34910261
Length = 153
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 262 PKNLSISARLPSPAPALYRSISIITPNGEDTTFLSFDDVYV 140
P + S +L A A Y+ + +ITP G++ F + DD Y+
Sbjct: 42 PSLKASSKKLDVSAMATYK-VKLITPEGQEHEFEAPDDTYI 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,376,856
Number of Sequences: 37544
Number of extensions: 389678
Number of successful extensions: 1125
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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