Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O02
(414 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 214 3e-56
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 214 3e-56
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 214 3e-56
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 207 5e-54
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 207 5e-54
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 207 5e-54
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 207 5e-54
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 159 1e-39
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 159 1e-39
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 214 bits (523), Expect = 3e-56
Identities = 91/137 (66%), Positives = 106/137 (77%)
Frame = +2
Query: 2 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYA 181
E VP C GH +LW GYSLLY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYA
Sbjct: 1565 ETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYA 1624
Query: 182 SRNDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
SRND+++WL+T IPMMPV EI YISRCVVCE P+NVIAVHSQT+++P CP GW
Sbjct: 1625 SRNDKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEG 1684
Query: 362 LWIGYSFVMHTGAGGQG 412
LWIGYSF+MHT G G
Sbjct: 1685 LWIGYSFLMHTAVGNGG 1701
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
VP C G LW GYS L++ Q L GSC+ F PF+ C+ C++
Sbjct: 1675 VPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHF- 1733
Query: 182 SRNDRSYW---LSTGQPI---PMMPV*GNEIVTYISRCVVC 286
S+W L + QP + E +++SRC VC
Sbjct: 1734 YETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVC 1774
Score = 35.1 bits (77), Expect = 0.037
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
+I HSQ+ +P C G +ELW GYS + G
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYSLLYVDG 1588
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 214 bits (523), Expect = 3e-56
Identities = 91/137 (66%), Positives = 106/137 (77%)
Frame = +2
Query: 2 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYA 181
E VP C GH +LW GYSLLY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYA
Sbjct: 1565 ETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYA 1624
Query: 182 SRNDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
SRND+++WL+T IPMMPV EI YISRCVVCE P+NVIAVHSQT+++P CP GW
Sbjct: 1625 SRNDKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEG 1684
Query: 362 LWIGYSFVMHTGAGGQG 412
LWIGYSF+MHT G G
Sbjct: 1685 LWIGYSFLMHTAVGNGG 1701
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
VP C G LW GYS L++ Q L GSC+ F PF+ C+ C++
Sbjct: 1675 VPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHF- 1733
Query: 182 SRNDRSYW---LSTGQPI---PMMPV*GNEIVTYISRCVVC 286
S+W L + QP + E +++SRC VC
Sbjct: 1734 YETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVC 1774
Score = 35.1 bits (77), Expect = 0.037
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
+I HSQ+ +P C G +ELW GYS + G
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYSLLYVDG 1588
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 214 bits (523), Expect = 3e-56
Identities = 91/137 (66%), Positives = 106/137 (77%)
Frame = +2
Query: 2 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYA 181
E VP C GH +LW GYSLLY+DGN+ AHNQDLG GSCV +FST+P L C N+VCNYA
Sbjct: 1565 ETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPGSCVPRFSTLPVLSCGQNNVCNYA 1624
Query: 182 SRNDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
SRND+++WL+T IPMMPV EI YISRCVVCE P+NVIAVHSQT+++P CP GW
Sbjct: 1625 SRNDKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEG 1684
Query: 362 LWIGYSFVMHTGAGGQG 412
LWIGYSF+MHT G G
Sbjct: 1685 LWIGYSFLMHTAVGNGG 1701
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
VP C G LW GYS L++ Q L GSC+ F PF+ C+ C++
Sbjct: 1675 VPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHF- 1733
Query: 182 SRNDRSYW---LSTGQPI---PMMPV*GNEIVTYISRCVVC 286
S+W L + QP + E +++SRC VC
Sbjct: 1734 YETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVC 1774
Score = 35.1 bits (77), Expect = 0.037
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
+I HSQ+ +P C G +ELW GYS + G
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYSLLYVDG 1588
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 207 bits (505), Expect = 5e-54
Identities = 90/137 (65%), Positives = 105/137 (76%)
Frame = +2
Query: 2 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYA 181
E VP C GH +LW GYSLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYA
Sbjct: 1564 ETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYA 1620
Query: 182 SRNDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
SRND+++WL+T IPMMPV EI YISRCVVCE P+NVIAVHSQT+++P CP GW
Sbjct: 1621 SRNDKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEG 1680
Query: 362 LWIGYSFVMHTGAGGQG 412
LWIGYSF+MHT G G
Sbjct: 1681 LWIGYSFLMHTAVGNGG 1697
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
VP C G LW GYS L++ Q L GSC+ F PF+ C+ C++
Sbjct: 1671 VPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHF- 1729
Query: 182 SRNDRSYW---LSTGQPI---PMMPV*GNEIVTYISRCVVC 286
S+W L + QP + E +++SRC VC
Sbjct: 1730 YETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVC 1770
Score = 35.1 bits (77), Expect = 0.037
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
+I HSQ+ +P C G +ELW GYS + G
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYSLLYVDG 1587
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 207 bits (505), Expect = 5e-54
Identities = 90/137 (65%), Positives = 105/137 (76%)
Frame = +2
Query: 2 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYA 181
E VP C GH +LW GYSLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYA
Sbjct: 210 ETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYA 266
Query: 182 SRNDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
SRND+++WL+T IPMMPV EI YISRCVVCE P+NVIAVHSQT+++P CP GW
Sbjct: 267 SRNDKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEG 326
Query: 362 LWIGYSFVMHTGAGGQG 412
LWIGYSF+MHT G G
Sbjct: 327 LWIGYSFLMHTAVGNGG 343
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
VP C G LW GYS L++ Q L GSC+ F PF+ C+ C++
Sbjct: 317 VPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHF- 375
Query: 182 SRNDRSYW---LSTGQPI---PMMPV*GNEIVTYISRCVVC 286
S+W L + QP + E +++SRC VC
Sbjct: 376 YETITSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVC 416
Score = 35.1 bits (77), Expect = 0.037
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
+I HSQ+ +P C G +ELW GYS + G
Sbjct: 202 LITRHSQSETVPACSAGHTELWTGYSLLYVDG 233
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 207 bits (505), Expect = 5e-54
Identities = 90/137 (65%), Positives = 105/137 (76%)
Frame = +2
Query: 2 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYA 181
E VP C GH +LW GYSLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYA
Sbjct: 1564 ETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYA 1620
Query: 182 SRNDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
SRND+++WL+T IPMMPV EI YISRCVVCE P+NVIAVHSQT+++P CP GW
Sbjct: 1621 SRNDKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEG 1680
Query: 362 LWIGYSFVMHTGAGGQG 412
LWIGYSF+MHT G G
Sbjct: 1681 LWIGYSFLMHTAVGNGG 1697
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
VP C G LW GYS L++ Q L GSC+ F PF+ C+ C++
Sbjct: 1671 VPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHF- 1729
Query: 182 SRNDRSYW---LSTGQPI---PMMPV*GNEIVTYISRCVVC 286
S+W L + QP + E +++SRC VC
Sbjct: 1730 YETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVC 1770
Score = 35.1 bits (77), Expect = 0.037
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
+I HSQ+ +P C G +ELW GYS + G
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYSLLYVDG 1587
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 207 bits (505), Expect = 5e-54
Identities = 90/137 (65%), Positives = 105/137 (76%)
Frame = +2
Query: 2 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYA 181
E VP C GH +LW GYSLLY+DGN+ AHNQDLG SCV +FST+P L C N+VCNYA
Sbjct: 1564 ETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLG---SCVPRFSTLPVLSCGQNNVCNYA 1620
Query: 182 SRNDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
SRND+++WL+T IPMMPV EI YISRCVVCE P+NVIAVHSQT+++P CP GW
Sbjct: 1621 SRNDKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEG 1680
Query: 362 LWIGYSFVMHTGAGGQG 412
LWIGYSF+MHT G G
Sbjct: 1681 LWIGYSFLMHTAVGNGG 1697
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
VP C G LW GYS L++ Q L GSC+ F PF+ C+ C++
Sbjct: 1671 VPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLEDFRATPFIECNGAKGTCHF- 1729
Query: 182 SRNDRSYW---LSTGQPI---PMMPV*GNEIVTYISRCVVC 286
S+W L + QP + E +++SRC VC
Sbjct: 1730 YETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQVC 1770
Score = 35.1 bits (77), Expect = 0.037
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
+I HSQ+ +P C G +ELW GYS + G
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYSLLYVDG 1587
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 159 bits (386), Expect = 1e-39
Identities = 69/139 (49%), Positives = 94/139 (67%), Gaps = 4/139 (2%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC LW+GYSL +A QDLG +GSC+ +F+TMP++ CD+ +VC++A
Sbjct: 1525 VPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQN 1584
Query: 188 NDRSYWLSTGQPIP--MMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S WLST +P+P M P+ G +++ YISRCVVCE + +IA+HSQ++ IP CP GW E
Sbjct: 1585 NDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEE 1644
Query: 362 LWIGYSFVMHT--GAGGQG 412
+W GYS+ M T GG G
Sbjct: 1645 MWTGYSYFMSTLDNVGGVG 1663
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYID-GNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYAS 184
+P C G ++W GYS N Q+L GSC+ +F P + C + CNY
Sbjct: 1635 IPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGHGRCNYYD 1694
Query: 185 RNDRSYWLSTGQP-----IPMMPV*GNEIVTYISRCVVCEVPSN 301
S+WL+ + P + + ISRC VC N
Sbjct: 1695 AL-ASFWLTVIEEQDQFVQPRQQTLKADFTSKISRCTVCRRRGN 1737
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYS 379
+ A HSQ++ +P CP + LW GYS
Sbjct: 1515 IFARHSQSVHVPQCPANTNLLWEGYS 1540
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 159 bits (386), Expect = 1e-39
Identities = 69/139 (49%), Positives = 94/139 (67%), Gaps = 4/139 (2%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC LW+GYSL +A QDLG +GSC+ +F+TMP++ CD+ +VC++A
Sbjct: 1527 VPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMPYMLCDITNVCHFAQN 1586
Query: 188 NDRSYWLSTGQPIP--MMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S WLST +P+P M P+ G +++ YISRCVVCE + +IA+HSQ++ IP CP GW E
Sbjct: 1587 NDDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEE 1646
Query: 362 LWIGYSFVMHT--GAGGQG 412
+W GYS+ M T GG G
Sbjct: 1647 MWTGYSYFMSTLDNVGGVG 1665
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYID-GNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYAS 184
+P C G ++W GYS N Q+L GSC+ +F P + C + CNY
Sbjct: 1637 IPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLEEFRAQPVIECHGHGRCNYYD 1696
Query: 185 RNDRSYWLSTGQP-----IPMMPV*GNEIVTYISRCVVCEVPSN 301
S+WL+ + P + + ISRC VC N
Sbjct: 1697 AL-ASFWLTVIEEQDQFVQPRQQTLKADFTSKISRCTVCRRRGN 1739
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYS 379
+ A HSQ++ +P CP + LW GYS
Sbjct: 1517 IFARHSQSVHVPQCPANTNLLWEGYS 1542
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,647,438
Number of Sequences: 53049
Number of extensions: 434085
Number of successful extensions: 991
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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