Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O02
(414 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 241 1e-64
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 241 1e-64
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 240 3e-64
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 240 3e-64
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 240 3e-64
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 240 3e-64
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 199 7e-52
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 199 7e-52
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 199 7e-52
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 199 7e-52
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 28 3.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 24 6.7
Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical pr... 27 7.1
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 241 bits (591), Expect = 1e-64
Identities = 101/135 (74%), Positives = 114/135 (84%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1543 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1602
Query: 188 NDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
ND+SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1603 NDKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1662
Query: 368 IGYSFVMHTGAGGQG 412
IGYSF MHTGAG +G
Sbjct: 1663 IGYSFAMHTGAGAEG 1677
Score = 49.2 bits (112), Expect = 1e-06
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
+P C G LW GYS ++ + Q L GSC+ F PF+ C+ C+Y
Sbjct: 1651 IPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYF 1710
Query: 182 SRNDRSYWLSTGQ-----PIP-MMPV*GNEIVTYISRCVVC 286
+ N S+WL+T +P + + T +SRC VC
Sbjct: 1711 A-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1750
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
V+ HSQT ++P CP G ++LW GYS + G
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEG 1564
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 241 bits (591), Expect = 1e-64
Identities = 101/135 (74%), Positives = 114/135 (84%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1544 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1603
Query: 188 NDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
ND+SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1604 NDKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1663
Query: 368 IGYSFVMHTGAGGQG 412
IGYSF MHTGAG +G
Sbjct: 1664 IGYSFAMHTGAGAEG 1678
Score = 49.2 bits (112), Expect = 1e-06
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
+P C G LW GYS ++ + Q L GSC+ F PF+ C+ C+Y
Sbjct: 1652 IPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYF 1711
Query: 182 SRNDRSYWLSTGQ-----PIP-MMPV*GNEIVTYISRCVVC 286
+ N S+WL+T +P + + T +SRC VC
Sbjct: 1712 A-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1751
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
V+ HSQT ++P CP G ++LW GYS + G
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEG 1565
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 240 bits (587), Expect = 3e-64
Identities = 100/135 (74%), Positives = 114/135 (84%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1544 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1603
Query: 188 NDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
N++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1604 NEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1663
Query: 368 IGYSFVMHTGAGGQG 412
IGYSF MHTGAG +G
Sbjct: 1664 IGYSFAMHTGAGAEG 1678
Score = 46.4 bits (105), Expect = 8e-06
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
+P C G LW GYS ++ + Q GSC+ F PF+ C+ C+Y
Sbjct: 1652 IPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYF 1711
Query: 182 SRNDRSYWLSTGQ-----PIP-MMPV*GNEIVTYISRCVVC 286
+ N S+WL+T +P + + T +SRC VC
Sbjct: 1712 A-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1751
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
V+ HSQT ++P CP G ++LW GYS + G
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEG 1565
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 240 bits (587), Expect = 3e-64
Identities = 100/135 (74%), Positives = 114/135 (84%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1543 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1602
Query: 188 NDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
N++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1603 NEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1662
Query: 368 IGYSFVMHTGAGGQG 412
IGYSF MHTGAG +G
Sbjct: 1663 IGYSFAMHTGAGAEG 1677
Score = 46.4 bits (105), Expect = 8e-06
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
+P C G LW GYS ++ + Q GSC+ F PF+ C+ C+Y
Sbjct: 1651 IPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYF 1710
Query: 182 SRNDRSYWLSTGQ-----PIP-MMPV*GNEIVTYISRCVVC 286
+ N S+WL+T +P + + T +SRC VC
Sbjct: 1711 A-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1750
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
V+ HSQT ++P CP G ++LW GYS + G
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEG 1564
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 240 bits (587), Expect = 3e-64
Identities = 100/135 (74%), Positives = 114/135 (84%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1580 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1639
Query: 188 NDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
N++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1640 NEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1699
Query: 368 IGYSFVMHTGAGGQG 412
IGYSF MHTGAG +G
Sbjct: 1700 IGYSFAMHTGAGAEG 1714
Score = 46.4 bits (105), Expect = 8e-06
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
+P C G LW GYS ++ + Q GSC+ F PF+ C+ C+Y
Sbjct: 1688 IPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYF 1747
Query: 182 SRNDRSYWLSTGQ-----PIP-MMPV*GNEIVTYISRCVVC 286
+ N S+WL+T +P + + T +SRC VC
Sbjct: 1748 A-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1787
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
V+ HSQT ++P CP G ++LW GYS + G
Sbjct: 1570 VLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEG 1601
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 240 bits (587), Expect = 3e-64
Identities = 100/135 (74%), Positives = 114/135 (84%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 46 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 105
Query: 188 NDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
N++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 106 NEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 165
Query: 368 IGYSFVMHTGAGGQG 412
IGYSF MHTGAG +G
Sbjct: 166 IGYSFAMHTGAGAEG 180
Score = 49.2 bits (112), Expect = 1e-06
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LNDVCNYA 181
+P C G LW GYS ++ + Q L GSC+ F PF+ C+ C+Y
Sbjct: 154 IPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYF 213
Query: 182 SRNDRSYWLSTGQ-----PIP-MMPV*GNEIVTYISRCVVC 286
+ N S+WL+T +P + + T +SRC VC
Sbjct: 214 A-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 253
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTG 397
V+ HSQT ++P CP G ++LW GYS + G
Sbjct: 36 VLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEG 67
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 199 bits (485), Expect = 7e-52
Identities = 86/137 (62%), Positives = 105/137 (76%), Gaps = 2/137 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SR
Sbjct: 1290 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1349
Query: 188 NDRSYWLSTGQPI-PMM-PV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS
Sbjct: 1350 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1409
Query: 362 LWIGYSFVMHTGAGGQG 412
+W GYSFVMHT AG +G
Sbjct: 1410 MWTGYSFVMHTAAGAEG 1426
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYAS 184
VPQC G +W GYS +++ + Q L GSC+ +F +PF+ C CNY +
Sbjct: 1400 VPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGRGTCNYYA 1459
Query: 185 RNDRSYWLS 211
N +WLS
Sbjct: 1460 TN-HGFWLS 1467
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 308 AVHSQTLDIPGCPVGWSELWIGYSFVMHTGAG 403
A HSQT +P CP G S+LW GYS + G G
Sbjct: 1282 AKHSQTTAVPQCPPGASQLWEGYSLLYVQGNG 1313
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 199 bits (485), Expect = 7e-52
Identities = 86/137 (62%), Positives = 105/137 (76%), Gaps = 2/137 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SR
Sbjct: 1547 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1606
Query: 188 NDRSYWLSTGQPI-PMM-PV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS
Sbjct: 1607 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1666
Query: 362 LWIGYSFVMHTGAGGQG 412
+W GYSFVMHT AG +G
Sbjct: 1667 MWTGYSFVMHTAAGAEG 1683
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYAS 184
VPQC G +W GYS +++ + Q L GSC+ +F +PF+ C CNY +
Sbjct: 1657 VPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGRGTCNYYA 1716
Query: 185 RNDRSYWLS 211
N +WLS
Sbjct: 1717 TN-HGFWLS 1724
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 308 AVHSQTLDIPGCPVGWSELWIGYSFVMHTGAG 403
A HSQT +P CP G S+LW GYS + G G
Sbjct: 1539 AKHSQTTAVPQCPPGASQLWEGYSLLYVQGNG 1570
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 199 bits (485), Expect = 7e-52
Identities = 86/137 (62%), Positives = 105/137 (76%), Gaps = 2/137 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SR
Sbjct: 1546 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1605
Query: 188 NDRSYWLSTGQPI-PMM-PV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS
Sbjct: 1606 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1665
Query: 362 LWIGYSFVMHTGAGGQG 412
+W GYSFVMHT AG +G
Sbjct: 1666 MWTGYSFVMHTAAGAEG 1682
Score = 51.2 bits (117), Expect = 3e-07
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYAS 184
VPQC G +W GYS +++ + Q L GSC+ +F +PF+ C CNY +
Sbjct: 1656 VPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGRGTCNYYA 1715
Query: 185 RNDRSYWLS 211
N +W S
Sbjct: 1716 TN-HGFWPS 1723
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 308 AVHSQTLDIPGCPVGWSELWIGYSFVMHTGAG 403
A HSQT +P CP G S+LW GYS + G G
Sbjct: 1538 AKHSQTTAVPQCPPGASQLWEGYSLLYVQGNG 1569
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 199 bits (485), Expect = 7e-52
Identities = 86/137 (62%), Positives = 105/137 (76%), Gaps = 2/137 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SR
Sbjct: 101 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 160
Query: 188 NDRSYWLSTGQPI-PMM-PV*GNEIVTYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS
Sbjct: 161 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 220
Query: 362 LWIGYSFVMHTGAGGQG 412
+W GYSFVMHT AG +G
Sbjct: 221 MWTGYSFVMHTAAGAEG 237
Score = 51.2 bits (117), Expect = 3e-07
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYAS 184
VPQC G +W GYS +++ + Q L GSC+ +F +PF+ C CNY +
Sbjct: 211 VPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGRGTCNYYA 270
Query: 185 RNDRSYWLS 211
N +W S
Sbjct: 271 TN-HGFWPS 278
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 308 AVHSQTLDIPGCPVGWSELWIGYSFVMHTGAG 403
A HSQT +P CP G S+LW GYS + G G
Sbjct: 93 AKHSQTTAVPQCPPGASQLWEGYSLLYVQGNG 124
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHN 91
V + GHVK+WDG S ++ ++AH+
Sbjct: 275 VTASKDGHVKIWDGVSNRCVETFKRAHD 302
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 89 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ 220
NQD+G+ CV KF T +++ C + Y ++ GQ
Sbjct: 61 NQDVGFQSKCVGKFDTGSMATMNMDVACAF-DEISAKYVIAAGQ 103
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 411 PCPPAPVCMTKL*P 370
PCPP P+C + P
Sbjct: 44 PCPPPPICPPQFCP 57
Score = 21.4 bits (43), Expect(2) = 6.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 414 PPCPPAP 394
PPCPP P
Sbjct: 28 PPCPPPP 34
>Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 304 NIRWHFAYNTSRNVCYYLISLHRHHWNRLT 215
N+ W + + SRN+CY +H N L+
Sbjct: 301 NVYWTYVHRRSRNLCYGNHRMHNLQLNYLS 330
>Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 304 NIRWHFAYNTSRNVCYYLISLHRHHWNRLT 215
N+ W + + SRN+CY +H N L+
Sbjct: 301 NVYWTYVHRRSRNLCYGNHRMHNLQLNYLS 330
>Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical
protein F22D6.9 protein.
Length = 368
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 2 EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFS 133
EVV H++ D +LL + + N+ G+ G CVR++S
Sbjct: 154 EVVLMLFAMHLRWPDRVTLLRGNHESRPVNRQYGFYGECVRRYS 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,609,278
Number of Sequences: 27780
Number of extensions: 227234
Number of successful extensions: 544
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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