Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O02
         (414 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g72760.1 68414.m08413 protein kinase family protein contains ...    30   0.54 
At3g52490.1 68416.m05772 heat shock protein-related contains sim...    28   2.2  
At3g06520.1 68416.m00756 agenet domain-containing protein contai...    28   2.9  
At2g27570.1 68415.m03340 sulfotransferase family protein similar...    27   5.0  
At2g13680.1 68415.m01508 glycosyl transferase family 48 protein ...    27   5.0  
At5g15540.1 68418.m01819 expressed protein low similarity to DNA...    26   8.7  
At1g47450.1 68414.m05260 expressed protein                             26   8.7  

>At1g72760.1 68414.m08413 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 697

 Score = 30.3 bits (65), Expect = 0.54
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +2

Query: 11  PQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRK-FSTMPFLFCDL---NDVCNY 178
           PQC   HV+L D     + D  ++AH   L + G C RK       +  D+   N + NY
Sbjct: 43  PQCVLIHVQLGDTGGHFHQDNPDEAHEFFLPFRGFCARKGIIAKEVILHDIDISNAIVNY 102

Query: 179 ASRN 190
            + N
Sbjct: 103 ITNN 106


>At3g52490.1 68416.m05772 heat shock protein-related contains
           similarity to 101 kDa heat shock protein; HSP101
           [Triticum aestivum] gi|11561808|gb|AAC83689
          Length = 815

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -1

Query: 348 TGQPGMSNVWLWTAITLDGTSHTTHLEM 265
           +GQP + ++W  T +T+  TS++  L +
Sbjct: 349 SGQPSLESLWCLTTLTIPATSNSLRLSL 376


>At3g06520.1 68416.m00756 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 466

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 159 RSQKRNGIVLNFRTHEPAYPRSWLCA 82
           R Q   G ++  R+ E AY  SW CA
Sbjct: 166 RDQYEKGALVEVRSEEKAYKGSWYCA 191


>At2g27570.1 68415.m03340 sulfotransferase family protein similar to
           steroid sulfotransferase from [Brassica napus]
           GI:3420008, GI:3420006; contains Pfam profile PF00685:
           Sulfotransferase domain
          Length = 273

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 171 QTSLRSQKRNGIVLNFRTHEPAYPRSWLCAFSFPSIYNSE*PSHNFTCP 25
           Q + + Q  N IV +F    P    +WL A +F  ++ S+ PSH+   P
Sbjct: 57  QKNFKPQDTNIIVASF----PKCGTTWLKALTFSLVHRSKHPSHDHHHP 101


>At2g13680.1 68415.m01508 glycosyl transferase family 48 protein
           contains Pfam profile: PF02364 1,3-beta-glucan synthase
          Length = 1923

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 77  EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
           EKAH  D    G  VR+F T+ F   + ++  + ASR
Sbjct: 71  EKAHRLDPSSGGRGVRQFKTLLFQRLERDNASSLASR 107


>At5g15540.1 68418.m01819 expressed protein low similarity to DNA
           repair and meiosis protein Rad9 [Coprinus cinereus]
           GI:1353390, SP|Q09725 Sister chromatid cohesion protein
           mis4 {Schizosaccharomyces pombe}
          Length = 1755

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
 Frame = +2

Query: 149 FCD-LNDVCNYAS----RNDRSYWLSTGQPIPMMPV*GNEIVTYISRCVVCEVPSNVIAV 313
           FC+ L D C  A       D + W S   P+  + V  NE++T  S+ ++  VP ++++ 
Sbjct: 245 FCEMLEDFCGRAEVPGDDRDEAEWSSV--PVDEVRVLINELMTIRSKMLLHMVPVDILSR 302

Query: 314 HSQTLD 331
             +TLD
Sbjct: 303 LLRTLD 308


>At1g47450.1 68414.m05260 expressed protein
          Length = 169

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
 Frame = +2

Query: 2   EVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYA----GSCVRK 127
           E++   +  H +L +G+S +Y+ GN  A ++D+ Y+      CVR+
Sbjct: 112 EILKMGKDCHFRLVEGWSAMYVYGNSIA-SKDIPYSKQSWNECVRR 156


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,853,114
Number of Sequences: 28952
Number of extensions: 201707
Number of successful extensions: 465
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 625471056
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)