Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_O01
(481 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358147-1|AAQ88514.1| 953|Homo sapiens UNC5D protein. 32 1.2
AB055056-1|BAB83663.1| 948|Homo sapiens KIAA1777 protein (Unc5h... 32 1.2
U83411-1|AAB58911.1| 641|Homo sapiens carboxypeptidase Z precur... 30 4.8
BC080539-1|AAH80539.1| 652|Homo sapiens carboxypeptidase Z prot... 30 4.8
BC109191-1|AAI09192.1| 526|Homo sapiens CR1L protein protein. 29 6.4
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 29 8.5
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 29 8.5
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 29 8.5
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 29 8.5
BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor, argini... 29 8.5
AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein. 29 8.5
AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of white-apr... 29 8.5
AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white apr... 29 8.5
>AY358147-1|AAQ88514.1| 953|Homo sapiens UNC5D protein.
Length = 953
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 288 GVFGRNGGGFITPNNSAA---PHGPIPEFN 368
GVFG GG + PN + PHG IPE N
Sbjct: 546 GVFGHLGGRLVMPNTGVSLLIPHGAIPEEN 575
>AB055056-1|BAB83663.1| 948|Homo sapiens KIAA1777 protein (Unc5h4)
protein.
Length = 948
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 288 GVFGRNGGGFITPNNSAA---PHGPIPEFN 368
GVFG GG + PN + PHG IPE N
Sbjct: 541 GVFGHLGGRLVMPNTGVSLLIPHGAIPEEN 570
>U83411-1|AAB58911.1| 641|Homo sapiens carboxypeptidase Z precursor
protein.
Length = 641
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 247 WRIAPPG--IALEPIMGYSEGTAAVL*PPTIRRPPMVQFPSSIKGTGPQ 387
WR+ PPG I + GY++ V+ P ++R V F G GP+
Sbjct: 530 WRLLPPGIHIVIAQAPGYAKVIKKVIIPARMKRAGRVDFILQPLGMGPK 578
>BC080539-1|AAH80539.1| 652|Homo sapiens carboxypeptidase Z
protein.
Length = 652
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 247 WRIAPPG--IALEPIMGYSEGTAAVL*PPTIRRPPMVQFPSSIKGTGPQ 387
WR+ PPG I + GY++ V+ P ++R V F G GP+
Sbjct: 541 WRLLPPGIHIVIAQAPGYAKVIKKVIIPARMKRAGRVDFILQPLGMGPK 589
>BC109191-1|AAI09192.1| 526|Homo sapiens CR1L protein protein.
Length = 526
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 342 PHGPIPEFNKRHGATARAFSSPCLARTQWASARDSHRHSS 461
P G + R G + R FS CL + W SA+D + S
Sbjct: 56 PIGTYLNYECRPGYSGRPFSIICLKNSVWTSAKDKCKRKS 95
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 324 PNNSAAPHGPIPEFNKRHGATARAFSSP 407
P NS AP P P + +HG T+ + S P
Sbjct: 716 PVNSTAPAAPAPSSSPKHGLTSGSASPP 743
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 324 PNNSAAPHGPIPEFNKRHGATARAFSSP 407
P NS AP P P + +HG T+ + S P
Sbjct: 666 PVNSTAPAAPAPSSSPKHGLTSGSASPP 693
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 324 PNNSAAPHGPIPEFNKRHGATARAFSSP 407
P NS AP P P + +HG T+ + S P
Sbjct: 666 PVNSTAPAAPAPSSSPKHGLTSGSASPP 693
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 324 PNNSAAPHGPIPEFNKRHGATARAFSSP 407
P NS AP P P + +HG T+ + S P
Sbjct: 666 PVNSTAPAAPAPSSSPKHGLTSGSASPP 693
>BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor,
arginine/serine-rich 16 protein.
Length = 659
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 248 GASHHQESRSNP*WGIRKERRRFYNPQQFGGPPWSNSRVQ*KARGHS 388
G HH SRS W + R R + P S SR + ++R S
Sbjct: 470 GLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQS 516
>AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein.
Length = 594
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 248 GASHHQESRSNP*WGIRKERRRFYNPQQFGGPPWSNSRVQ*KARGHS 388
G HH SRS W + R R + P S SR + ++R S
Sbjct: 485 GLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQS 531
>AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of
white-apricot homolog 2 protein.
Length = 659
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 248 GASHHQESRSNP*WGIRKERRRFYNPQQFGGPPWSNSRVQ*KARGHS 388
G HH SRS W + R R + P S SR + ++R S
Sbjct: 470 GLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQS 516
>AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white
apricot homolog 2 protein.
Length = 659
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 248 GASHHQESRSNP*WGIRKERRRFYNPQQFGGPPWSNSRVQ*KARGHS 388
G HH SRS W + R R + P S SR + ++R S
Sbjct: 470 GLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQS 516
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,665,795
Number of Sequences: 237096
Number of extensions: 1226805
Number of successful extensions: 6312
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6311
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -