Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O01
         (481 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.1  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +3

Query: 297 GRNGGGFITPNNSAAPHGPIPEFNKRHGATARAFSSP 407
           GR   G+    ++A  H P+ E N       R  S+P
Sbjct: 485 GRKDSGYDGAASTAVIHEPVVETNSSPSPNPRIASAP 521


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 338 RRIVGGYKTAAVPSEYPIMGSSAI 267
           R +V  Y    V  EY I G+SAI
Sbjct: 98  RAVVAQYYDTDVNKEYAIRGNSAI 121


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 379 PCLLLNSGIGPWGAAELLGV 320
           P LL+ SGIGP      LG+
Sbjct: 327 PQLLMLSGIGPKEHLRSLGI 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,774
Number of Sequences: 438
Number of extensions: 1945
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)