Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_O01
         (481 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g63470.1 68418.m07968 CCAAT-box binding transcription factor ...    28   2.8  
At5g38450.1 68418.m04648 cytochrome P450 family protein similar ...    28   2.8  
At1g75400.1 68414.m08759 expressed protein                             28   3.7  
At5g47580.1 68418.m05873 expressed protein strong similarity to ...    27   5.0  
At3g48590.1 68416.m05305 CCAAT-box binding transcription factor ...    27   8.7  

>At5g63470.1 68418.m07968 CCAAT-box binding transcription factor
           Hap5a, putative
          Length = 250

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 347 MGGRRIVGGYKTAAVPSEYPIMGSSAIPGGAM 252
           +GG  +V     + VP  YP MG  A+PGG M
Sbjct: 169 LGGGGMVAP-AASGVPYYYPPMGQPAVPGGMM 199


>At5g38450.1 68418.m04648 cytochrome P450 family protein similar to
           cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus]
          Length = 518

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 242 PTGASHHQESRSNP*WGIRKERRRFYNPQQFGGPPWSNSR 361
           P  A HH E      WG  K+  +F NP++FGG P+++ R
Sbjct: 420 PVLAIHHSEEL----WG--KDANQF-NPERFGGRPFASGR 452


>At1g75400.1 68414.m08759 expressed protein
          Length = 455

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 242 PTGASHHQESRSNP*WGIRKERRRFYNPQQFGGPPWS 352
           P  +S H+ S  +P W  R++ RR    +  G P +S
Sbjct: 20  PASSSVHRNSACSPQWSFRRDNRRRVADEIEGSPYYS 56


>At5g47580.1 68418.m05873 expressed protein strong similarity to
           unknown protein (pir||E71441)
          Length = 748

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 354 LDHGGPPNCWGL 319
           L HG PPNCW L
Sbjct: 484 LAHGEPPNCWAL 495


>At3g48590.1 68416.m05305 CCAAT-box binding transcription factor
           Hap5a, putative
          Length = 234

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 347 MGGRRIVGGYKTAAVPSEYPIMGSSAIPGGAM 252
           +GG  +V     + VP  YP MG  A PGG M
Sbjct: 153 LGGGMVVAP-TASGVPYYYPPMGQPAGPGGMM 183


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,822,526
Number of Sequences: 28952
Number of extensions: 165656
Number of successful extensions: 444
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)