Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_N24
         (124 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-13|CAH60789.1|  515|Caenorhabditis elegans Hypothetical p...    30   0.26 
Z72507-10|CAA96629.1|  531|Caenorhabditis elegans Hypothetical p...    30   0.26 
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    25   9.8  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    25   9.8  

>Z72507-13|CAH60789.1|  515|Caenorhabditis elegans Hypothetical
           protein F17C11.7b protein.
          Length = 515

 Score = 29.9 bits (64), Expect = 0.26
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 40  ETCXLRLPYSQWLVRLTQFPP 102
           +TC L +P+ + L+RL Q+PP
Sbjct: 375 QTCELTIPFDKQLLRLEQYPP 395


>Z72507-10|CAA96629.1|  531|Caenorhabditis elegans Hypothetical
           protein F17C11.7a protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 0.26
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 40  ETCXLRLPYSQWLVRLTQFPP 102
           +TC L +P+ + L+RL Q+PP
Sbjct: 391 QTCELTIPFDKQLLRLEQYPP 411


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
           protein H05L14.2 protein.
          Length = 2162

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
 Frame = +1

Query: 64  YSQWLVRLTQFP---PRNTNWKW 123
           Y QW+V +  FP   P +  WK+
Sbjct: 211 YFQWMVSMVNFPNNIPADVRWKY 233


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
           protein H05L14.2 protein.
          Length = 2162

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
 Frame = +1

Query: 64  YSQWLVRLTQFP---PRNTNWKW 123
           Y QW+V +  FP   P +  WK+
Sbjct: 211 YFQWMVSMVNFPNNIPADVRWKY 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,164,153
Number of Sequences: 27780
Number of extensions: 38832
Number of successful extensions: 71
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 12,740,198
effective HSP length: 21
effective length of database: 12,156,818
effective search space used: 230979542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)