Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_N23
(459 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 4e-35
SB_37182| Best HMM Match : DUF225 (HMM E-Value=1) 30 1.1
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0) 28 4.3
SB_42600| Best HMM Match : Calx-beta (HMM E-Value=8.3e-07) 27 5.6
SB_59554| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 27 7.5
SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4) 27 7.5
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_28899| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_22380| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_45263| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0026) 27 9.9
SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 144 bits (348), Expect = 4e-35
Identities = 67/95 (70%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +3
Query: 87 NCEVFFEEKFSDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 266
N V F EKF D SWE WV S G + GKFK TAGKFY DAEADKG+QTSEDA+FY +
Sbjct: 753 NPVVHFLEKFEDKSWEDRWVSSTSKGAQQGKFKWTAGKFYGDAEADKGIQTSEDAKFYGI 812
Query: 267 SRKF-KPFSNEGKPLVVQFSVKHEQDIDCGGGYLK 368
S KF KPF+NEGK LV+QFSVKHEQ+IDCGGGY K
Sbjct: 813 SAKFEKPFTNEGKTLVIQFSVKHEQNIDCGGGYAK 847
>SB_37182| Best HMM Match : DUF225 (HMM E-Value=1)
Length = 1282
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -3
Query: 352 PQSMSCSCFTLNCTTKGLP-SLLNGLNFLDRA 260
P + SC CF + C+ + +P S+L +++L RA
Sbjct: 150 PIACSCRCFPITCSCRCVPQSMLMSMSYLSRA 181
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 359 LPEGIRL*TGPEGHAWRDTLTRLCLGLISVVP 454
LPE IRL PE R+ +T LC+G+ VP
Sbjct: 187 LPEAIRL--SPEVSVLRERVTDLCMGVARYVP 216
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.3 bits (60), Expect = 3.2
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = -3
Query: 355 PPQSMSCSCFTLNCTTKGLPSLLNG-LNFLDRA*NLASSDVCKPLSASASL*NFPAVNLN 179
P + SC C + T GLP L++G + + S P S SL + V
Sbjct: 429 PSEQNSCQCLFVGWQTVGLPQLIHGTVALISFRRKRTLSGGSLPRGRSRSL-SSDRVGTR 487
Query: 178 LPNSFPGCSLYTQFDSHESSENFSSKNTSQ 89
LP++ G + S+ + S+ +SQ
Sbjct: 488 LPSARKGSASKIGIPRTSSTGSLGSRRSSQ 517
>SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0)
Length = 1086
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1
Query: 415 PYEIMFGPDICG 450
PY IMFGPD CG
Sbjct: 40 PYTIMFGPDKCG 51
>SB_42600| Best HMM Match : Calx-beta (HMM E-Value=8.3e-07)
Length = 424
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +3
Query: 108 EKFSDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADKGLQTSEDARFYALSRKFKPF 287
EK + S E ++ +S + GK K Y + A+ G+ S + ++ +K PF
Sbjct: 270 EKVNSSSGEGDY-FSWYSGKNITLPKGKNYTTYTVSVANDGVPESNETFTISMQKKSHPF 328
Query: 288 SNEGKPLVVQFSVKHEQDIDC 350
G P ++ + + C
Sbjct: 329 ITFGTPTTTTITIIDDDKVTC 349
>SB_59554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1247
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 326 EARTGHRLRRRLPEGIRL*TGPEGH 400
EA+ G +L + P+G++ T P GH
Sbjct: 451 EAKPGEKLAQLFPDGLKPVTDPSGH 475
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 225 YPPLRHCRTFQQSI*TCRILFRGVHYIPNL 136
+P LRHC+T+Q ++ +L G+ + NL
Sbjct: 503 FPGLRHCKTYQSAL----LLLHGIPVVYNL 528
>SB_23942| Best HMM Match : 5-nucleotidase (HMM E-Value=4)
Length = 735
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 247 TRGSTPYRGNSSHSAMRANLWW 312
T+G Y GNS+H+ + NL W
Sbjct: 90 TQGGIIYLGNSAHAVKKLNLIW 111
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 313 TTKGLPSLLNGLNFLDRA*NLASSDVCKPLSASA 212
TT+GLPS ++ +N + NL S KP S+
Sbjct: 960 TTQGLPSKISSVNLTEALSNLISISWSKPSDGSS 993
>SB_28899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 247 TRGSTPYRGNSSHSAMRANLWW 312
T+G Y GNS+H+ + NL W
Sbjct: 90 TQGGIIYLGNSAHAVKKLNLIW 111
>SB_22380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 211 TQRRIKVYRHLKTRGSTPYRGNSSHSAM 294
TQR + RH+ TR + S HS M
Sbjct: 470 TQRHVTTQRHVTTRRQVTHNVRSQHSVM 497
>SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 408 RHACPSGPVYSRIPSGNRLRSRCPVRA 328
RHA + PV G+R+R R PV A
Sbjct: 1358 RHASCTRPVNDESSKGDRIRQRSPVNA 1384
>SB_45263| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0026)
Length = 123
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 93 EVFFEEKFSD--DSWE-SNWVYSEHPGKEFGKFKLTAGK 200
E FF E+ S+ D W W+ SE P K+ G + G+
Sbjct: 82 EDFFMERVSNYRDGWGIEKWMVSEQPHKDTGTIDFSTGQ 120
>SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 232 YRHLKTRGSTPYRGNSSHSAMRANLWWYSSV*STNRTSTAEA 357
+ H+ T+ + G+ S + A++WW V + S AEA
Sbjct: 851 WHHVPTKDNPADLGSRGGSVVNADMWWKGIVLEQSVESKAEA 892
>SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 26.6 bits (56), Expect = 9.9
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = -3
Query: 298 PSLLNGLNFLDRA*NLASSDVCKPLSASASL*NFPAVNLNLPNSFPGCSLYTQFDSHESS 119
P LN LDR+ +P S++A L + L P+ S +S
Sbjct: 537 PESLNTGGSLDRSRKKPLPGQPRPASSAADLYSSKQQRLQ-PSYHRPTSFQANGQREDSP 595
Query: 118 ENFSSKNTSQFIDEIANKLA 59
S + S+F+ ++ANKLA
Sbjct: 596 SKPRSPSHSEFLQQVANKLA 615
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,489,615
Number of Sequences: 59808
Number of extensions: 315573
Number of successful extensions: 816
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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